Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq530 102 7e-17 seq102 86.0 5e-12 seq507 82.4 6e-11 >seq530 Length=912484 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || |||||| || || || || Sbjct 250230 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 250171 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| |||||||| |||||||| |||||||| ||||| || Sbjct 250170 GCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTG 250111 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||| || |||| ||| | || ||||||||||| || Sbjct 250110 ACGTTCTCAATGGTGTCACTCGGTTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 250051 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 250050 TTCACAAAGATCTGCATGCCT 250030 >seq102 Length=3625303 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | ||||| |||||| || || || || Sbjct 3125437 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCTTCCAGCTGCTTGCCG 3125378 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| || || || Sbjct 3125377 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTG 3125318 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || |||| ||| | || ||||| || || ||| Sbjct 3125317 ACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTT 3125258 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 3125257 TTCACAAAAATCTGCAT 3125241 >seq507 Length=976482 Score = 82.4 bits (90), Expect = 6e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 114189 GATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCG 114248 ||| | ||||||||||| ||||| || ||| || |||||| || ||||||||||| Sbjct 343443 GATACCTTTTGAATGTTATAATCAGACAGAGTGCGGCCATCTTCCAGCTGTTTACCAGCA 343502 Query 114249 TAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 | || |||||||||||||| |||||||| ||| Sbjct 343503 AAAATCAGACGCTGTTGGTCAGGAGGAATTCCT 343535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420063999785388