Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq148 118 2e-21 >seq148 Length=2989754 Score = 118 bits (130), Expect = 2e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 |||||| || || |||||||||||||| | ||||||||| | || | ||||| ||| Sbjct 2370629 CATGAAAAGATCTGGGATCCAGAGGGCGTAGAAGAGGTCTCGGGCGCGTTGCTCCTCCTT 2370570 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 || ||||||||| |||| |||| ||| ||||||| ||||| ||||||||||||| ||| Sbjct 2370569 CCCCGTGTTCTTCTTCAGGTCCAGAAACTCAAAGATGTCGAAATGCCAGGGCTCCAGGTA 2370510 Query 245131 GACAGCGAGGGCGCCGGG 245148 || |||| ||| || || Sbjct 2370509 GATGGCGAAGGCCCCCGG 2370492 Score = 118 bits (130), Expect = 2e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 244704 CCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763 |||||||||| | | ||||||| || ||||||||||||||||| ||||||||||| | Sbjct 2372627 CCACCTCCTCTTGGCTCGTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTG 2372568 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 | ||||||| ||| || ||| ||| |||||||| |||||||||||||||| | || Sbjct 2372567 TCCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGG 2372508 Query 244824 CCCCGGTCTCGAGCTGGG 244841 ||| ||||| ||||| Sbjct 2372507 TCCCCGTCTCCGTCTGGG 2372490 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 244322 CCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA 244381 || |||||||||||| ||||||||||||| ||| || || | || |||| | Sbjct 2374784 CCTTTGCTGACGGGGGAGCCCTCGTAGGTCTCGTACGGCCCCTGCTCCTTAGCCACTTCG 2374725 Query 244382 CAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGC-G 244440 ||||| | || || || ||||||| |||||||| |||||| || ||||| | || | Sbjct 2374724 CAGCTGGCTTCTAGCGCCCCGTAGTAAATGGTCTCAAAGATCTGCTGGTTCA-GCAGCTG 2374666 Query 244441 GGCCTTGCCGCAGGTGAAGGGGATGCC-CATCATCATGAAGACGTCGGCCAGTCCCTGCA 244499 |||| || | || |||| || ||||| || || |||| ||||| ||||||| Sbjct 2374665 CGCCTCTGGGC-TCTCAAACGGATACCGCATCAGGATAAAAGCGTCCGCCAGCCCCTGCA 2374607 Query 244500 CGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 | || ||||||||||| | ||| ||| |||| ||| Sbjct 2374606 CTCCAATGCCGATGGGCCGGTGGCGCCTGTTTGAG 2374572 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 |||| | |||||||||||||| || || || ||||| ||||| ||||||| || || Sbjct 2376478 GTTCTCTACCTGAAACTCTCCAGAGAGAACCCGGCGTGTGTAGATGTTGCTGGTGTAGGG 2376419 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 || ||| ||| ||||||||| || || ||||| || || ||||| || | ||| Sbjct 2376418 TTCAATGGACTCGTTGTTGCCCAAGATTTGTGCCGTCGAAGCTGTTGGCATCGGGGCCAC 2376359 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCT 244236 ||| || ||||| || | ||||| ||| Sbjct 2376358 CAGGAGGCTGTTTCTAATGCCGTACCT 2376332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944176903504240