Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq102 113 1e-19 >seq102 Length=3625303 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| || || || ||||| | || || || || ||| Sbjct 3125659 TCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAG 3125600 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || ||||||||||| || || || Sbjct 3125599 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACA 3125543 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || |||| || || || || ||||| ||||| ||||||| ||||| Sbjct 3125542 TTTTCAATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTC 3125483 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 3125482 ACAAAGATCTGCAT 3125469 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || || ||| Sbjct 3125887 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 3125828 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | || || ||||| || ||||||||||| || || || || Sbjct 3125827 ATCAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTC 3125768 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || |||| || || || | ||||| ||||| || |||| ||||| || Sbjct 3125767 TCAATGGTGTCACTCGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 3125708 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3125707 AAGATCTGCAT 3125697 Score = 102 bits (112), Expect = 2e-16 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||||| || || ||||| | || || || || ||| Sbjct 3125431 TCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAG 3125372 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| ||| |||||| || ||||| || ||||||||||| || || || Sbjct 3125371 ATCAGCCTCTGCTGA---TCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACA 3125315 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || | ||||| ||||| || || || || || Sbjct 3125314 TTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTTTTC 3125255 Query 288460 ACGAATATCTGCATTATG 288477 || || ||||||||| || Sbjct 3125254 ACAAAAATCTGCATTTTG 3125237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179446593186822