Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq102 104 2e-17 seq530 95.1 1e-14 seq148 93.3 4e-14 >seq102 Length=3625303 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||| || ||| || ||||| || || Sbjct 3125437 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCTTCCAGCTGCTTGCCG 3125378 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | ||||||||| || || ||||| ||||||||| |||||| |||| Sbjct 3125377 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTG 3125318 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | ||| | || ||||| || || ||| Sbjct 3125317 ACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTT 3125258 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 3125257 TTCACAAAAATCTGCAT 3125241 >seq530 Length=912484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || ||||| || || || ||||| ||| | ||||| | Sbjct 250248 CGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA 250189 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||| | |||||| || || || |||||||| ||| Sbjct 250188 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTG 250129 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTC---TCGACTTCGACGGTC 127075 ||| ||| || ||||| | || | |||||| |||| || || || | ||| Sbjct 250128 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTCGGTTCCACCTCCAGGGTG 250072 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || ||||||||||| || || ||||| ||||||||| || Sbjct 250071 ATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATGCCT 250030 >seq148 Length=2989754 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||| ||||||| ||||||||||||||||||||| | |||| || | ||||| Sbjct 2372607 TACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGGTTG 2372548 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTA--CGGTCCCC 146782 || | |||||||| |||||||||||||||||| ||||||| Sbjct 2372547 CTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCC 2372503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475419079243760