Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq182 131 2e-25 >seq182 Length=2638091 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGT-TTGAGAACATCGCAGAC 9797 ||||| |||| |||||| ||| ||||||| || || || ||| ||||||| ||| ||||| Sbjct 1924466 GTTTGGAACAGCTGCTCATCATCCCATTCTGGATGCTC-TGTCTTGAGAATATCACAGAC 1924524 Query 9798 CCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAA 9857 || ||||||||||| ||||| | ||||| |||||||| || || || || || ||||| Sbjct 1924525 CCGGTTGTGTTCTCGAAGCCACAATGTGGCATACATCATCAATCCTGGAACCAAGCCAAA 1924584 Query 9858 CACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATG 9917 || || | ||| || | ||| ||| | || || | ||| | ||| | ||| | Sbjct 1924585 GACCTCTTGCCCTACAGAAAATTTCAGGTGCTCAGGGGTGTGGGGTGGATAGATCATTTC 1924644 Query 9918 CACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCTG 9968 | || || ||||| || ||||| |||||||| || || ||||| | ||| Sbjct 1924645 TGCTTGAGTTTCTTTCACTGTGGGTGGATACATCTCTCCATCAATCATCTG 1924695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723603618296600