Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq148 122 1e-22 >seq148 Length=2989754 Score = 122 bits (134), Expect = 1e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | ||| |||| ||||| || || |||| Sbjct 2379669 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGCTTGCCGTAATTGGGCTCCGCAATGT 2379610 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | |||||||| |||||||| ||||| ||||| | | |||| || || ||||| |||| | Sbjct 2379609 GGATGTTCAGCGACTGGCTCTGGTCAATGAAGGCCCCCCGGTCGGCAGCCATCTTGAGGA 2379550 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||||||| ||||||||||||||||||||| Sbjct 2379549 CCGTCTTCTGGGAAATCTCCCACACCGTCTTG 2379518 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||||||||| | ||| | |||||| | ||||| | ||||||||| Sbjct 2372605 CTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGGTTGCT 2372546 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA 204999 ||| ||||| |||||||||||||| | |||| | || | || ||||| |||| || Sbjct 2372545 CTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCCGTCTCCGTCTGGGA 2372489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795018542639440