Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq102 150 4e-31 seq530 149 1e-30 >seq102 Length=3625303 Score = 150 bits (166), Expect = 4e-31 Identities = 169/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 3125453 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATC 3125394 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||| || || ||| ||||| || Sbjct 3125393 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 3125334 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| || || | |||||| ||| || || ||||| ||||| || Sbjct 3125333 CTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGT 3125274 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCT 199640 ||| || ||||| |||||||||||||| || |||||| |||| Sbjct 3125273 CTTGCCAGTGAGGGTTTTCACAAAAATCTG---CATTTT-GCCT 3125234 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3125681 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATC 3125622 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 3125621 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 3125562 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| || ||| | |||||| | | || || |||| ||||| || Sbjct 3125561 CTGGATTTTAGCCTTGACATTTTCAATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGT 3125502 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | || |||||||| || || Sbjct 3125501 CTTGCCGGTCAAGGTCTTCACAAAGATCTG 3125472 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 3125909 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 3125850 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| |||||||| ||||| ||||| || | ||||||||| ||| ||| ||||| || Sbjct 3125849 TTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTGTC 3125790 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| || || | |||||| | | || || ||||| ||||| || Sbjct 3125789 CTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTCGGCTCCACCTCCAAGGTGATGGT 3125730 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | || |||||||| || || Sbjct 3125729 CTTGCCAGTCAAGGTCTTCACAAAGATCTG 3125700 >seq530 Length=912484 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 249106 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 249047 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 249046 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 248987 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 248986 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 248927 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 248926 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 248897 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 249334 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 249275 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 249274 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 249215 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 249214 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 249155 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 249154 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 249125 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 249562 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 249503 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 249502 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 249443 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 249442 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 249383 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 249382 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 249353 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 249790 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 249731 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 249730 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 249671 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 249670 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 249611 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 249610 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 249581 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 250018 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 249959 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 249958 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 249899 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 249898 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 249839 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 249838 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 249809 Score = 147 bits (162), Expect = 5e-30 Identities = 165/220 (75%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 248650 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 248591 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 248590 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 248531 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 248530 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTCGGCTCCACCTCCAGGGTGATGGT 248471 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTA 199636 ||| ||||| || || |||||||| || || ||||||| Sbjct 248470 CTTGCCCGTCAGGGTCTTCACAAAGATCTG---CATTTTA 248434 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 248878 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 248819 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 248818 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 248759 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 248758 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGT 248699 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || |||||||| || || Sbjct 248698 CTTGCCCGTCAGGGTCTTCACAAAGATCTG 248669 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 250246 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 250187 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||||||||| ||| || ||| || Sbjct 250186 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTC 250127 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| | | ||| || |||| ||||| || Sbjct 250126 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGTTCCACCTCCAGGGTGATGGT 250067 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || |||||||| || || Sbjct 250066 CTTGCCGGTCAGGGTCTTCACAAAGATCTG 250037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178713922276183