Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq277 232 5e-55 seq119 163 2e-34 seq7 105 5e-17 seq418 96.9 3e-14 seq528 95.1 9e-14 >seq277 Length=1877347 Score = 232 bits (256), Expect = 5e-55 Identities = 939/1461 (64%), Gaps = 24/1461 (2%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||||||||| ||||| || || |||| ||| ||| || | || || || ||||| Sbjct 578769 ATTAGTAATTGTAATCTTGTTCTCTTTGCCTGTGCTTTTGTCCACTGCTGTGACGTTAAG 578710 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 ||| ||||| ||||| | ||||| |||||||| ||||| || || || | | || || Sbjct 578709 AATGCCATTTGCATCAATGTCAAAAGTGACTTCGATTTGTGGCACACCACGGGGTGCTGG 578650 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||| || ||| | | ||| | || || ||||| || ||||| | |||||| Sbjct 578649 TGGAATACCTGTTAGGTCAAACTTGCCTAGCAAGTTATTGTCCTTAGTCATGGCTCGTTC 578590 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTT-TGATTATCTGAATAAGTTGTAAATACTC 517451 |||||| | | || | || || ||| || || |||||||| || || || || Sbjct 578589 ACCCTCATACACCTGCACCAGCAC-ACTGTTCTGGTTGTCTGAATAGGTGGTGAA-GGTC 578532 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 ||| | | || |||||| || ||||| | | ||| | ||||| | |||||| Sbjct 578531 TGGGTCTGCTTTGTAGGAATAGTAGTGTTGCGTTTAATCAAGGCAGTCATCACACCACCA 578472 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570 || || || | || || || || || | |||||||| || | || | ||| | || Sbjct 578471 GCCGTCTCAATGCCCAGTGACAGTGGTGCGACATCAAGGAGCAGAAGGTCTTGCACATTC 578412 Query 517571 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 ||| | | ||| | || || || || || | ||||||||| || || ||||||||| Sbjct 578411 TCAGACTTGTCACCCATCAGGATTGCAGCCTGCACAGCAGCACCGTAAGCCACAGCTTCA 578352 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCT 517689 ||||| || | | ||| || || | ||| |||||||| || | || | || || | Sbjct 578351 TCAGGGTTGATACTTTTGTTGAGCTCTTTGCCATTGAAGAAGTCCTGTAGCAACTTCT-G 578293 Query 517690 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | |||||| ||||| | || || ||||| || ||||| |||| | ||| ||| || Sbjct 578292 GATCTTAGGGATACGGGTGGAGCCGCCAACCAACACAATCTCATTGATCTGCCCTTTGTC 578233 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 || || | ||| | | || || || || ||||| | | || | || | Sbjct 578232 GAGCTTGGCATCACGCAGGGCCTTCTCCACAGGCTCAAGGGTGCCACGGAAAAGATCAGC 578173 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 517867 | ||||| || || || | || || || | || || ||||| || || ||| Sbjct 578172 ATTGAGTTCCTCAAAGCGGGCACGGGT--GATGGATGTGTAGAAGTCAATGCCATCAAAC 578115 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 || || |||| ||||| | || ||| || || || || | ||| || || | |||| Sbjct 578114 AAGGAGTCAATCTCAATAGAAGCTTGGGTGGAGGAGCTGAGGGTACGCTTGGCCCTTTCA 578055 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAA-ATCTGTTTTATAT 517984 || ||||| | || | ||| | | || ||| || | ||| || |||| Sbjct 578054 CAGGCTGTACGGAGCCGTCGAACTGCCCTCTTGTTGCCAG---CAATGTCACGCTTATGC 577998 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 || | |||||| || || ||| | | || | || || ||||| || || || ||| Sbjct 577997 TTGCGCTTGAACTCCTCCACAAAGTGGCTCACCATGCGGTTGTCAAAGTCCTCGCCACCC 577938 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 | | ||||| |||| |||| | | || | || | |||||||||| | ||| | Sbjct 577937 AGGTGAGTATCACCTGCTGTAGATTTCACCTCAAAGATGCCATCTTCAATGGTCAAGATC 577878 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC----TTTGTC 518160 | |||||| ||| |||||||||| ||||| || ||||||||| | || | | Sbjct 577877 GAGACATCAAAGGTGCCACCACCCAAGTCAAAGATCAGTACATTCTTCTCACCAGCTCTA 577818 Query 518161 TTG--GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 || || ||||| | |||||| |||| ||||||||||| || |||||||| || | | Sbjct 577817 CTGCCTTTCTTATCCAAACCATAGGCAATGGCAGCAGCAGTGGGCTCATTAATGATGCGC 577758 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | || || || || | || | || ||||| || |||||||| | || || || || Sbjct 577757 AGGACGTTGAGGCCCGTGATGGTGCCAGCATCCTTGGTGGCTTGGCGCTGGGAGTCATTG 577698 Query 518279 AAATATGCAGGAACAGTAATAACGGCA-TCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 || || ||||| || || || || ||| || | |||| || | |||||| || Sbjct 577697 AAGTAGGCAGGCACGGTGATGACAGCACTCTG-GACTTTGCGTCCCAGATAAGCCTCGGC 577639 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGA 518397 ||| |||||| || | | | ||| || ||||| | || ||| | | |||| Sbjct 577638 AATTTCTTTCATCTTTGTCAGCACCATGGAAGAAATCTCCTCAGGGAAGAAGGTCTTGTG 577579 Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 || | || || | | | || || || || | | || || || Sbjct 577578 CTCTCCCTTGTACTCGACCTGCACCTTGGGCTTCCCGCCTTCACTCACCACACGGAAAGG 577519 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 518517 ||||| ||||||||| || || || | | || | || | | || || | || || Sbjct 577518 CCAGTGTTTCATATCGGACTGCACGGTGGGATCGTCGAATTTGCGGCCGATGAGGCGCTT 577459 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 ||||| || || || ||| | ||||| || || | || | |||||||||||||| || Sbjct 577458 GGCATCGAAGATGGTGTTGTTGGGATTCATCGCCACCTGGTTCTTGGCTGCATCTCCGAT 577399 Query 518578 CAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 518637 || | || || || || || | ||||| ||||| ||||| || ||||| || || Sbjct 577398 GAGGCGCTCGGTGTCCGTGAAGGCCACATAGCTGGGAGTGGTGCGGTTGCCTTGGTCGTT 577339 Query 518638 CGCAATAATTTCAACTTTACC 518658 || || || || ||||| || Sbjct 577338 GGCGATGATCTCCACTTTCCC 577318 >seq119 Length=3366018 Score = 163 bits (180), Expect = 2e-34 Identities = 462/698 (66%), Gaps = 15/698 (2%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 ||||| ||||| || || || ||||| | || | || | ||| | | |||| || Sbjct 3317785 CGATTGTCAAAGTCCTCGCCACCCAAGTGGGTGTCCCCGGCCGTTGACTTGACTTCAAAG 3317844 Query 518081 AGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | |||||||||| | || | ||| || ||| ||| || || || | ||||| | Sbjct 3317845 ATGCCATCTTCAATGGTGAGGATGGAG--ACGTCAAAGGTGCCGCCGCCAAGGTCAAAGA 3317902 Query 518139 TAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198 | | ||||| | ||| || ||||| || | ||||| |||||||||| |||| Sbjct 3317903 TCAACACATTTCTCTCTGCACCTACTTTTTTGTCCTGTCCATAAGCAAAAGCAGTGGCAG 3317962 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 |||| |||||||| ||| | |||||||| |||||||| |||| |||||||| || Sbjct 3317963 TTGGCTCATTAATGATTTGGAGCACATTAAGGCCAGCAATGGTTCCAGCATCTTTTGTCA 3318022 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCT 518317 | || ||| || || || ||||| || || || |||| ||| | ||| ||| ||| Sbjct 3318023 CCTGGTGTTGGGAGTCATTGAAATAAGCTGGGACTGTAACCGTGGCGTTAGTAACTGTCT 3318082 Query 518318 TTACCAATATAAGCGCTTGCCGTT---TGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 || |||| || || || | ||| | |||||||| ||| | || || || || Sbjct 3318083 TTCCCAAG-TACGC-CTCG--GTTATCTTGTTCATTTTGGTTAGCACTATAGAGGATATC 3318138 Query 518375 TGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTA 518434 | || || || | ||| | ||| || || || | | | ||| || | Sbjct 3318139 TCCTCGGGATAAAAGCTCTTCGTTTCTCCTTTGTACTCCACCTGGACTTTTGGCCTACCA 3318198 Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494 || |||| | ||| | || ||||||| ||||||||| || || ||| | || | Sbjct 3318199 TCATCATTCACAACAGTGAAAGGCCAGTGTTTCATATCAGACTGGACAACAGCATAATCA 3318258 Query 518495 AAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 || ||| | |||||| | ||||||||||||| | | || || || || || || | Sbjct 3318259 AA-TCTGCGACCAATCAGGTGTTTTGCATCAAATACCATGTTTGTGGGGTTCATGGCCAC 3318317 Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 ||| | || || ||||||||||| || ||||| ||||| || | ||| || ||| Sbjct 3318318 TTGGTTATTTGCAGCATCTCCAATGAGCCTCTCTGTATCTGT-AAGGCAACGTAGCCTGG 3318376 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 || || | ||||| |||||||| ||||| ||||| || || |||| || | |||| Sbjct 3318377 CGTGGTCCTGTTACCCTGATCATTGGCAATGATTTCCACCTTGCCATGCTGAAAAGCACC 3318436 Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAATAG 518711 ||||| | || || || | |||||| |||| || Sbjct 3318437 CACACAGGAGTAGGTAGTGCCAAGATCAATGCCAACAG 3318474 Score = 102 bits (112), Expect = 6e-16 Identities = 191/277 (69%), Gaps = 3/277 (1%) Strand=Plus/Plus Query 518436 CAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAA 518495 || |||| | ||| | || ||||||| ||||||||| || || ||| | || || Sbjct 3319770 CATCATTCACAACAGTGAAAGGCCAGTGTTTCATATCAGACTGGACAACAGCATAATCAA 3319829 Query 518496 AATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554 | ||| | |||||| | ||||||||||||| | | || || || || || || || Sbjct 3319830 A-TCTGCGACCAATCAGGTGTTTTGCATCAAATACCATGTTTGTGGGGTTCATGGCCACT 3319888 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614 || | || || ||||||||||| || ||||| ||||| || | ||| || ||| Sbjct 3319889 TGGTTATTTGCAGCATCTCCAATGAGCCTCTCTGTATCTGT-AAGGCAACGTAGCCTGGC 3319947 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || || | ||||| |||||||| ||||| ||||| || || |||| || | |||| Sbjct 3319948 GTGGTCCTGTTACCCTGATCATTGGCAATGATTTCCACCTTGCCATGCTGAAAAGCACCC 3320007 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATAG 518711 ||||| | || || || | |||||| |||| || Sbjct 3320008 ACACAGGAGTAGGTAGTGCCAAGATCAATGCCAACAG 3320044 >seq7 Length=9770732 Score = 105 bits (116), Expect = 5e-17 Identities = 221/327 (68%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 || || || || ||||||||||||||||| | | | || |||| ||| || ||||| Sbjct 4205695 GCTCCGTAAGCTACAGCTTCATCAGGATTGATGCTCTTGTTGAGTTCTTTGCCGTTGAAG 4205636 Query 517670 AAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | ||| || | ||| | || || || || | || || ||||| | ||||| Sbjct 4205635 AAGTCCTGAAGCAGCT-TCTGGATTTTGGGGATTCGGGTGGACCCGCCAACCAGGACAAT 4205577 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| ||||| |||||||| || || | |||| | |||| || ||||| || || Sbjct 4205576 GTCATGTACCTGAGATTTATCGAGCTTCGCATCCCGCAGGGCTTTCTCCACGGGATCCAG 4205517 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | | |||||||| | | || ||||| || ||||||||||| | | || Sbjct 4205516 AGTGCCACGGAACAAGTCAGCATTCAGCTCTTCAAAGCGAGCTCTAGTAATTGAGGTATA 4205457 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | ||||| || ||| ||| ||||| | |||||| | | ||||| ||| || || Sbjct 4205456 GAAGTCAATGCCCTCGTACAGGGAATCGATTTCAATACTGGCCTGAGTGCTAGAGGAAAG 4205397 Query 517909 TGCACGTTTAGCACGTTCACATGCTGT 517935 | ||| || ||||| ||||| || || Sbjct 4205396 GGTACGCTTCGCACGCTCACAGGCAGT 4205370 >seq418 Length=1241430 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 |||||||| ||||||||||| || ||||||||||||||||| ||| | ||||| ||| Sbjct 927311 TGTACCCTGATTTTGACAGAAGGTGATTCAGCTAAAACATTGGCTGTTTCTGGCCTTGGA 927252 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | |||||||| | | |||||| ||||| || | ||||| | | |||||| | Sbjct 927251 GTTGTGGGAAGAGACAAATTTGGAGTGTTCCCCCTGCGTGGAAAGATGCTCAATGTTCGT 927192 Query 635561 GATGCT 635566 || ||| Sbjct 927191 GAAGCT 927186 >seq528 Length=914075 Score = 95.1 bits (104), Expect = 9e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 366995 TAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTC 367054 ||||||| || |||| || || ||||| || |||||| | ||| | || ||||||| Sbjct 522629 TAGTAGCTACTGTAGCCTTCGGAATGGGCATCAATAAAGCAGATATCAGGACAGTTATTC 522688 Query 367055 ATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTG 367114 | ||||| ||||| ||| | || ||| ||||| || |||||||| || |||||||||| Sbjct 522689 ACTATGGTGCTCCAAAGGAAATGGAATCATATTACCAGGAAATTGGAAGGGCAGGTCGTG 522748 Query 367115 ATGGA 367119 ||||| Sbjct 522749 ATGGA 522753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780140129330794