Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq148 98.7 1e-15 >seq148 Length=2989754 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 |||||||| | || || || || | |||| | ||| || ||||||| |||| ||| Sbjct 2372610 GTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGG 2372551 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||||| |||||| | ||||||||||||||||| || ||||||||||||||||| Sbjct 2372550 TTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCCGTCTCCGTCTGG 2372491 Query 106625 GACT 106628 |||| Sbjct 2372490 GACT 2372487 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||||||||||| | | || || || |||||||||||||| || || Sbjct 2376438 TAGATGTTGCTGGTGTAGGGTTCAATGGACTCGTTGTTGCCCAAGATTTGTGCCGTCGAA 2376379 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 ||||||||||| || |||| || || ||||| Sbjct 2376378 GCTGTTGGCATCGGGGCCACCAGGAGGCTGTT 2376347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589879404424760