Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq102 149 1e-30 seq530 140 7e-28 >seq102 Length=3625303 Score = 149 bits (164), Expect = 1e-30 Identities = 170/227 (75%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || |||||||| || |||||||| || || || ||||| |||| ||| || Sbjct 3125462 TCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGT 3125403 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || || ||||| |||||||| Sbjct 3125402 ACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 3125343 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 ||| ||||| || ||||| |||||| |||||||||||||| |||| ||||| || Sbjct 3125342 TTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTC---ACTTGGCTCCACCTC 3125286 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | ||| | ||||| || || | ||||| || || | ||||||| Sbjct 3125285 CAAGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCATTT 3125239 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 3125905 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 3125846 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| |||||||| ||||| ||||| || Sbjct 3125845 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGG 3125786 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 ||||| |||||| |||||||||||||| ||| ||||| || | ||| | ||| Sbjct 3125785 ATTTTAGCCTTGACATTCTCAATGGTGTC---ACTCGGCTCCACCTCCAAGGTGATGGTC 3125729 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| || || || || | ||||| Sbjct 3125728 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 3125697 Score = 136 bits (150), Expect = 9e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3125690 TCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 3125631 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || |||||||| |||||||| Sbjct 3125630 ACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCC 3125571 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 ||| ||||| || ||||| |||||| || ||||||||||| ||| ||||| || Sbjct 3125570 TTCCTTGTCCTGGATTTTAGCCTTGACATTTTCAATGGTGTC---ACTCGGCTCCACCTC 3125514 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || ||||| || || || || | ||||| Sbjct 3125513 CAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 3125469 >seq530 Length=912484 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 250242 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 250183 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 250182 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 250123 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||||||||||||||| ||| |||||| || ||||| | ||| Sbjct 250122 ATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTCGGTTCCACCTCCAGGGTGATGGTC 250066 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 250065 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 250034 Score = 138 bits (152), Expect = 3e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 248646 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 248587 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 248586 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 248527 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||||||||| ||||| || ||||| | ||||| Sbjct 248526 ATCTTGGCCTTGACGTTCTCAATGGTGTCGCTCGGCTCCACCTCCAGGGTGATGGTCTTG 248467 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || |||| || || || || | ||||||| Sbjct 248466 CCCGTCAGGGTCTTCACAAAGATCTGCATTT 248436 Score = 136 bits (150), Expect = 9e-27 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 248874 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 248815 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 248814 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 248755 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 248754 ATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 248698 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 248697 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248666 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 249102 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 249043 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 249042 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 248983 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| ||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 248982 ATCTTGGCCTTCACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 248926 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 248925 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248894 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 249330 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 249271 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 249270 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 249211 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| ||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 249210 ATCTTGGCCTTCACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 249154 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 249153 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249122 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 249558 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 249499 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 249498 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 249439 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| ||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 249438 ATCTTGGCCTTCACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 249382 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 249381 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249350 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 249786 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 249727 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 249726 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 249667 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| ||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 249666 ATCTTGGCCTTCACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 249610 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 249609 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249578 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 250014 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 249955 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| || |||||||| |||||||| || Sbjct 249954 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGG 249895 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| ||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 249894 ATCTTGGCCTTCACGTTCTCAATGGTGTC---ACTCGGCTCCACCTCCAGGGTGATGGTC 249838 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 249837 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109286154761483