Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq89 170 2e-37 seq63 138 1e-27 >seq89 Length=3767728 Score = 170 bits (188), Expect = 2e-37 Identities = 647/1003 (65%), Gaps = 17/1003 (2%) Strand=Plus/Plus Query 160037 CAGCGATCTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTC 160096 ||| | | |||| || |||| || |||| || || || || || ||||| ||| Sbjct 2533290 CAGAGTTTTGTGCCGTAGATACTCCTCCAAGCACTGAACTGCAAAGGGGTCAATGTCAGT 2533349 Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156 ||| || || || || || | ||||| ||| | || ||||||| || |||||| Sbjct 2533350 GTCAAACTTGTTGGCAAAGAAGTGGTGC---TTCCGCAGCATCCAGTTCAAGTCTCCCAC 2533406 Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216 || || || || || ||||| || || || || ||||||| ||||| |||| || || Sbjct 2533407 TCCAAAGACACACACTGAACGGATATGAACTCCACTGCAAGGTGGGTAGGGAGCCCCCTT 2533466 Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276 | ||| || || || | || |||||||| ||||||||||| | || | |||||| || Sbjct 2533467 TGACACATCTCCCTCAAAATAATGCCACTTAACAAACCTGGCAAGAGCATTCATGTCAGA 2533526 Query 160277 GGTGTCGTATTTGTACATCAGG--GGAACGGCACCGGGAACGCCGGGCATACGCTGTAGG 160334 | || ||||| | || | || || || ||||| || || | || || ||||| | Sbjct 2533527 GACATCATATTTCT-CA-CTGGCAGGGACTGCACCAGGGACTTCAGGAATTCGCTGAATA 2533584 Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCG 160394 || ||||| | || ||| || || ||||| ||||| || | |||||| | || | | Sbjct 2533585 GTAGCCCATAAGTATTCATCTGGACTGTATGTGTCTTTTGCCCATTCTACAAAAGCAAGG 2533644 Query 160395 ATTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTG 160454 ||| |||||| || || | || | || | || |||||||| || ||| Sbjct 2533645 ATTCTGCTGTCCTCCAATACATACTCTACAAACCTCCTACTAACCACAAAGTAGGCACTG 2533704 Query 160455 CCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACC 160514 || ||||| || || | | ||| || | |||||| || |||| ||| Sbjct 2533705 CCAGAGAAAATAGGGGTACTCAGAGGTGGTCGCTGCTTGTCCATTCCCATGTTCTTGACC 2533764 Query 160515 ACTCCTTTCACCAGC-GCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCG 160573 | || ||| || | | || |||||||||| | ||| ||| | | ||||| Sbjct 2533765 -TTACTATCAACAACTTCATGATGCTTCTTCCATCGTACCTCCTTATTTGAAGGCATTTT 2533823 Query 160574 TTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTT 160633 || || || | ||| || |||| | ||| | ||||| || || || ||||| |||| Sbjct 2533824 CTCTGTTTCCAAACTATTTTCACCCTTGAGGGCTTTCAACTTCTCTACTATCTCCTGGTT 2533883 Query 160634 CGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA--TTTCGC-GCT 160690 ||||| | || || || | || || | || || | |||| ||| ||| || || Sbjct 2533884 GGTCTTAATAGGGAAATCCATGCCACAAAGATTGATTAGGTACGCCCAGCTTTTGCTCCT 2533943 Query 160691 CAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTA 160750 | || | || ||| ||||||| || | || ||||| || | |||||| || || || Sbjct 2533944 CCTGTAG---AGATCCTTCATGCAGTTGAGGTCCGCCTGTACTCTGCTCCATGAGGCATA 2534000 Query 160751 CACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCAC 160810 ||||| |||| | | |||||| | || || || || ||||| || | || || Sbjct 2534001 AACTACACTCTCCAACTGACTGGCAATGAAAACATTGTCAAAACATGAGGCAATGCCTTT 2534060 Query 160811 CACCGCCAGAAAGAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCT 160869 || | ||| |||| | || | | ||| || || || | ||| || |||| Sbjct 2534061 AACTG-CAGCCAGAAAAGATTCTGGGGACTTCTTATCAACATGAATGCAGTAATAATTCT 2534119 Query 160870 GAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGA 160929 |||| || ||||| | || | | ||| || | ||| || || || ||||| | || | Sbjct 2534120 GAGGAGCATAGATTGATCTCAAAAGCCTATCAAGCATGTCAATTTTTTGATGAACTACAA 2534179 Query 160930 TAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTC 160989 | || || || || |||||||| | || || || || || | | | || || | Sbjct 2534180 TTGAATATGCAATAGGAAACTCTGCTTCTTCTTTGCTTAGAGATTCCATAATATATTTCC 2534239 Query 160990 GCGTCTTGATAAAATAATCACAATCCCGCGTCATGTTGATATA 161032 | |||| |||||| | |||| || |||||||| || || Sbjct 2534240 GTCTCTTAATAAAAGAGGCACAGTCTGTTGTCATGTTAATGTA 2534282 >seq63 Length=4466547 Score = 138 bits (152), Expect = 1e-27 Identities = 238/344 (69%), Gaps = 4/344 (1%) Strand=Plus/Minus Query 160619 GACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTT 160678 |||||||||| ||| ||||||| ||||||||||| ||||| || | | |||||| Sbjct 2142116 GACGATCTCTGCGTTGGTCTTGATGGGAAAGTCGGTCCCGCAGGTATTCAGGAGGTACTT 2142057 Query 160679 CCATTTCGCGCTCAGGTCGT--GCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGG 160736 ||| || | | || | ||||| |||||| || | ||| || ||||| ||| Sbjct 2142056 CCAGGGGACGTT--GCTCCGAAGGAGGTCTTCCATGCAGTTCAGATCCGCTTGCACCCGG 2141999 Query 160737 CTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACAC 160796 ||| || |||||||| || |||| || | ||||| ||||||||| || || || Sbjct 2141998 GACCAAGAGGCGTACACCACCGTCTCCTGTCTGGAGGCCAGAAAGACGTTCTCAAAGCAG 2141939 Query 160797 GACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACG 160856 || |||| || ||||| ||| || | ||| ||||||||| ||| Sbjct 2141938 GAGGCGATGGCCTGGACCGCTTCTTGGAAGGCTTTGGGTGACTTCTTGTCCACGTGGACG 2141879 Query 160857 CAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTA 160916 || || | |||||| || || ||||||||||| | | ||||||||||||||||||||| Sbjct 2141878 CAGTAGATGTTCTGGGGGGCATAGATGGCCCTTAAGAGCCTCTCGAACATCTCTATCTTT 2141819 Query 160917 TGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960 | |||| ||| || || || || || || || || |||||| Sbjct 2141818 TCGTGGACCACCATGGAATAAGCGATGGGGAAGTCCTCCTCCTC 2141775 Score = 122 bits (134), Expect = 1e-22 Identities = 236/348 (68%), Gaps = 9/348 (3%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||| ||||||| || ||||| || ||| |||| ||| || | ||||| | Sbjct 2142684 TGTGGCGCAGATACTCTTCCAGGCACAGGATGGCGTTGTTGTCGACCTGGGGATCGAACT 2142625 Query 160105 TATTTGCGAACAGATGGTG---AGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGA 160161 | || || || || ||||| |||| || |||||||| | ||| || |||| Sbjct 2142624 TGTTAGCAAAGAGGTGGTGCTGAGCG------AGCATCCAGTGGAGGTCCCCTACCCCGT 2142571 Query 160162 ACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCA 160221 | |||||||| | || | || || |||| || || ||| | || || || | Sbjct 2142570 AGACGCAGACCGCCCGCTGGGAGACCCCCGTGCAGGGGGGATACGGGGCCCCCTTGCTGA 2142511 Query 160222 CGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGT 160281 |||| |||||| ||| ||||||||| |||||||| || || | |||||| | | || Sbjct 2142510 CGTCTCCTTCGCTGTAAACCCACTTCACCAACCTGGCAATGGCGTTCATGTCTGTGAGGT 2142451 Query 160282 CGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCC 160341 | ||||| | | || || | || ||||| |||||||| || |||| || |||| Sbjct 2142450 CAAATTTGGCATTGAAAGGGACTGATCCTGGAACTCCGGGCATCCGATGTAAAGTAGCCC 2142391 Query 160342 ACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 |||||||||| || || ||||| ||||| || |||| |||| || || Sbjct 2142390 ACAGGTGTTCATCCGGACTGTAAGTGTCTTTGCACCACTCCAGGAGCT 2142343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577119997665240