Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq548 224 2e-52 seq604 217 2e-50 seq21 215 8e-50 seq91 102 1e-15 seq148 96.9 5e-14 seq552 93.3 7e-13 >seq548 Length=871607 Score = 224 bits (248), Expect = 2e-52 Identities = 201/250 (80%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 289316 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 289257 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| ||||||||| | | Sbjct 289256 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 289197 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| |||||||| | ||||||| |||| |||||||||||||| ||||| Sbjct 289196 GGGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACAAAGGAGTT 289139 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| ||||| Sbjct 289138 CATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTT 289079 Query 1485708 GTAAACAAAG 1485717 ||| ||| || Sbjct 289078 GTAGACATAG 289069 Score = 223 bits (246), Expect = 5e-52 Identities = 198/246 (80%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 782900 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 782959 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| |||||||| || | Sbjct 782960 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGGGATGGTGGAGCGCTTGTTGTAAT 783019 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || ||| |||||||| | ||||||| |||| |||||||||||||| ||||| Sbjct 783020 GGGCG--AGCCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACAAAGGAGTT 783077 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| |||||||||| ||| ||||| ||||||||||| ||||| Sbjct 783078 CATGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCCGGGTGGACCTGCTTGAGGACCTT 783137 Query 1485708 GTAAAC 1485713 ||| || Sbjct 783138 GTAGAC 783143 Score = 219 bits (242), Expect = 7e-51 Identities = 204/257 (79%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 313487 GTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCAG 313546 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGTG 1485588 || || | ||||||||||||||||| |||| | ||| ||| |||||||| || || Sbjct 313547 GAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAATG 313606 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 ||| |||||| |||||||| | ||||||| |||| ||||||||||| || |||||| Sbjct 313607 GGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAAATGTCGTTGACGAAGGAGTTC 313664 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| |||||| Sbjct 313665 ATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTTG 313724 Query 1485709 TAAACAAAGGACGAGTA 1485725 || ||| || ||||| Sbjct 313725 TAGACATAGATGGAGTA 313741 Score = 217 bits (240), Expect = 2e-50 Identities = 197/246 (80%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 293877 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 293936 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| |||||||| || | Sbjct 293937 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 293996 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| |||||||| | ||||||| |||| ||||||||||| || ||||| Sbjct 293997 GGGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTT 294054 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| ||||| Sbjct 294055 CATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTT 294114 Query 1485708 GTAAAC 1485713 ||| || Sbjct 294115 GTAGAC 294120 Score = 217 bits (240), Expect = 2e-50 Identities = 197/246 (80%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 332569 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 332510 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| ||||||||| | | Sbjct 332509 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 332450 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| |||||||| | ||||||| |||| ||||||||||| || ||||| Sbjct 332449 GGGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTT 332392 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| ||||| Sbjct 332391 CATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTT 332332 Query 1485708 GTAAAC 1485713 ||| || Sbjct 332331 GTAGAC 332326 Score = 214 bits (236), Expect = 3e-49 Identities = 196/246 (80%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 355062 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 355121 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| |||||||| || | Sbjct 355122 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 355181 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| |||||||| | ||||||| |||| ||||||||||| || ||||| Sbjct 355182 GGGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTT 355239 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| ||||| Sbjct 355240 CATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTT 355299 Query 1485708 GTAAAC 1485713 ||| || Sbjct 355300 GTAGAC 355305 >seq604 Length=741506 Score = 217 bits (240), Expect = 2e-50 Identities = 197/246 (80%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 470231 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCTCCGGGCA 470290 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | ||||||||||||||||| |||| | ||| ||| |||||||| || | Sbjct 470291 GGAGGAGCCTGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 470350 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| |||||| |||||||| | ||||||| |||| ||||||||||| || ||||| Sbjct 470351 GGGCG--AGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTT 470408 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | ||| ||||||||| ||| ||||| ||||||||||| ||||| Sbjct 470409 CATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGGACCTGCTTGAGGACCTT 470468 Query 1485708 GTAAAC 1485713 ||| || Sbjct 470469 GTAGAC 470474 >seq21 Length=6710168 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 5052222 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 5052281 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||||||||||||||| |||| | ||| ||| ||||||||| | Sbjct 5052282 GCAGGAGGCGCACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 5052341 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||| |||| |||||||| || || ||||||| Sbjct 5052342 GAGCCAGGCGGGAGGCCTCCCCTGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 5052401 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| ||||| |||||||| |||||||||| Sbjct 5052402 TGATGCTCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGGACCTGCTTCAGCACCTTGT 5052461 Query 1485710 AAAC 1485713 | || Sbjct 5052462 ACAC 5052465 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 5066782 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 5066723 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||||||||||||||| |||| | ||| ||| ||||||||| | Sbjct 5066722 GCAGGAGGCGCACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 5066663 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||| |||| |||||||| || || ||||||| Sbjct 5066662 GAGCCAGGCGGGAGGCCTCCCCTGCAATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 5066603 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||| ||||| |||||||| |||||||||| Sbjct 5066602 TGATGCTCATGGCCTTGGACGAGATGCCCGTGTCCGGGTGGACCTGCTTCAGCACCTTGT 5066543 Query 1485710 AAAC 1485713 | || Sbjct 5066542 ACAC 5066539 >seq91 Length=3736321 Score = 102 bits (112), Expect = 1e-15 Identities = 169/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| ||||| || || || || || ||||| | ||||| || ||| ||| Sbjct 45169 TGTATTTGGTGACCGCCTTCGTTCCTTCAGACACCGCGTGTTTCGCCAGCTCCCCGGGCA 45110 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||||| || ||||||||||| || | | ||||||| ||||||||| Sbjct 45109 GCAGGAGCCGCACAGCCGTCTGGATCTCCCGAGAGGTGATCGTGGAGCGCTTGTTGTAAT 45050 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| ||| || | |||| || |||| | || ||||| || || |||| Sbjct 45049 GGGCCAAGCGGGTGGCTTCCCCGGCGATACGCTCGAAAACATCATTGACGAAGGAATTCA 44990 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | ||| || ||||| || ||||| || || || || || |||| Sbjct 44989 TTATACTCATAGCTTTCGAAGAAATGCCAGTATCCGGGTGGACTTGTTTCAGAACTTTGT 44930 Query 1485710 AAAC 1485713 | || Sbjct 44929 ACAC 44926 >seq148 Length=2989754 Score = 96.9 bits (106), Expect = 5e-14 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 2073650 CGGCAAAGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGT 2073709 |||| | || ||||| || || | |||||||||||||||||||| |||||||| |||| Sbjct 2369005 CGGCCACCCCAATGCCCCCAGCAGACTTGGAGATGAGCGCGCACTGCTTCAGCGTGTCGT 2368946 Query 2073710 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752 |||| || ||||| |||| |||||||| || ||||||||| Sbjct 2368945 AGATCCCTTCGATGCTGTCGTCCTTCATGCACAGCAGAAAGCA 2368903 Score = 87.8 bits (96), Expect = 3e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 2071579 ACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 |||| ||||||||| |||||| || | | || |||||||||||||||||||| || Sbjct 2372601 ACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGGTTGCTCTTC 2372542 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 ||||| || |||||||| |||||||| || | |||||||| |||| | | | | Sbjct 2372541 CGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCCGTCTCCGTCTGGGACTCAATG 2372482 Query 2071699 ATGGCCGACCA 2071709 ||||| |||| Sbjct 2372481 ATGGCGTACCA 2372471 Score = 86.0 bits (94), Expect = 1e-10 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 2071846 GTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCC 2071905 ||| ||||||| ||| || || || |||| ||| |||| ||||| || || || Sbjct 2370643 GTCTCCACGCGTTTCATGAAAAGATCTGGGATCCAGAGGGCGTAGAAGAGGTCTCGGGCG 2370584 Query 2071906 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGC 2071965 || | ||||||||| || |||||| |||||||| || | || | || |||| ||| Sbjct 2370583 CGTTGCTCCTCCTTCCCCGTGTTCTTCTTCAGGTCCAGAAACTCAAAGATGTCGAAATGC 2370524 Query 2071966 CACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995 || |||||||||||| ||| ||||| ||| Sbjct 2370523 CAGGGCTCCAGGTAGATGGCGAAGGCCCCC 2370494 >seq552 Length=859566 Score = 93.3 bits (102), Expect = 7e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 434126 CGTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 434185 ||| ||||||||||||||| ||||||||||| | |||||| | |||||| |||||| Sbjct 672692 CGTCATCTCCTTTGACGGCTCCTACGTCAACTATCGCCACCTGGCGCTGCTGTGCGACAC 672633 Query 434186 CATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCG 434236 |||| |||||||| || ||||| |||| ||||| ||| ||||||| Sbjct 672632 CATGACGTGTCGCGGACACTTGATGGCCATCACCCGGCATGGCGTCAACCG 672582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914783856160811