Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq530 84.2 2e-11 >seq530 Length=912484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 107551 TTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGG 107610 |||||||||| || ||||| || || | || ||||| ||||| ||| | || |||| Sbjct 248433 TTAAAATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGC 248492 Query 107611 CTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGG 107670 | |||| || | | | || || ||||| || ||||| ||| | ||| || Sbjct 248493 CGAGCGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCGG 248552 Query 107671 ATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACT 107730 | |||||||| || || | ||| || || |||||||| || | | || | | |||| Sbjct 248553 ACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACT 248612 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||||| || |||||||| || | ||| |||| Sbjct 248613 ACAACATCCAGAAGGAGTCCACCCTCCACCTGGT 248646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398809961835061