Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28]
13,749 sequences; 1,716,675,060 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq530 122 7e-23
seq102 113 3e-20
>seq530
Length=912484
Score = 122 bits (134), Expect = 7e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 248664 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 248605
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 248604 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 248545
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || ||||| | || | ||||| | || ||
Sbjct 248544 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTCGGCTCCACC 248485
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791
|| || || || || ||||| || | ||| || ||||| |||||||||||||
Sbjct 248484 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTTAA 248433
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 250260 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 250201
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 250200 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 250141
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || ||||| | || | |||||| |||| ||
Sbjct 250140 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGTTCCACC 250081
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 250080 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 250034
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 248892 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 248833
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 248832 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 248773
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || ||||| | || | |||||| | || ||
Sbjct 248772 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGCTCCACC 248713
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 248712 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248666
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 249120 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 249061
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 249060 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 249001
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || || || | || | |||||| | || ||
Sbjct 249000 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACC 248941
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 248940 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248894
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 249348 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 249289
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 249288 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 249229
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || || || | || | |||||| | || ||
Sbjct 249228 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACC 249169
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 249168 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249122
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 249576 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 249517
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 249516 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 249457
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || || || | || | |||||| | || ||
Sbjct 249456 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACC 249397
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 249396 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249350
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 249804 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 249745
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 249744 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 249685
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || || || | || | |||||| | || ||
Sbjct 249684 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACC 249625
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 249624 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249578
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 250032 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 249973
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||| ||| | |||| || ||||| ||||| |||
Sbjct 249972 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 249913
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || || || | || | |||||| | || ||
Sbjct 249912 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACC 249853
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 249852 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249806
>seq102
Length=3625303
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| |||||| || | || || ||||| || || || ||||| || || | |
Sbjct 3125467 CCACCTCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 3125408
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || || ||||| ||| | |||| || |||||||| || |||
Sbjct 3125407 AGCGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3125348
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | ||| |||||| | || | |||||| | || ||
Sbjct 3125347 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 3125288
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || || || |||||||| | |||||| ||||| |||||||||||
Sbjct 3125287 TCCAAGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCATTTT 3125238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385154650383609
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |