Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq102 161 2e-34 seq427 131 3e-25 >seq102 Length=3625303 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| |||||| || | ||| || || || || ||||| || || || ||||| Sbjct 3125695 CCACCTCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3125636 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || || |||||||| || || || || ||||| || Sbjct 3125635 AGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 3125576 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || || || || || ||||||||||| || ||| | || || || Sbjct 3125575 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTTTCAATGGTGTCACTCGGCTCCACC 3125516 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||| || |||||||| ||||| ||||| ||||| |||||||| Sbjct 3125515 TCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 3125469 >seq427 Length=1217992 Score = 131 bits (144), Expect = 3e-25 Identities = 135/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198 |||||| |||| |||||||||||||| ||||| ||||| || || ||| | ||||| || Sbjct 60725 GATAGCTGGAGCTTTATGGTGGTACTACATATCAAAAGGAATCGAGTACCTGGATACAGT 60784 Query 60199 GTTTTTCATACTTAGGAAA-AAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATT 60257 |||||||| |||| |||| || ||||| || | | |||| |||| || ||||| || | Sbjct 60785 ATTTTTCAT-CTTAAGAAAGAAATTTAACCAAATCACTTTTCTACATGTTTATCACCACT 60843 Query 60258 TTACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 || ||||||||||| | ||||| || || |||||| |||| || || |||| Sbjct 60844 ACACCATGTTTACTTTGTGGTGGGTTGGTATAAAATGGGTTGCAGGGGGACAAG 60897 Score = 102 bits (112), Expect = 2e-16 Identities = 110/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 60443 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGTCCGTTTCCA 60502 |||||||| ||| || | || || ||||| ||||| ||||| || ||||| || ||||| Sbjct 64122 CAATTCCACATAACTCTTGGTCACACCGCCATGTCTATTTATATTGATTGCCCCTTTCCT 64181 Query 60503 AAATGGA--CACAATGGTCAGTTATCATTTATTCTATTACTTTTATATTACTGTTTGGTA 60560 || |||| ||| ||||| || || | ||| || | ||||| || | |||||||||| Sbjct 64182 AAGTGGATGCACTATGGT--GTCATTGTCTATGCTGTCACTTTCATTGTCCTGTTTGGTA 64239 Query 60561 ACTTCTATTTTAGAACATACAAGA 60584 ||||||| | | | |||||||||| Sbjct 64240 ACTTCTACTATCGGACATACAAGA 64263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981654242240911