Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq427 141 2e-28 >seq427 Length=1217992 Score = 141 bits (156), Expect = 2e-28 Identities = 136/172 (79%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| |||| |||||||||||||| ||||| ||||| || || ||| | |||||||| Sbjct 60725 GATAGCTGGAGCTTTATGGTGGTACTACATATCAAAAGGAATCGAGTACCTGGATACAGT 60784 Query 58429 GTTTTTCATACTTAGGAAA-AAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATT 58487 |||||||| |||| |||| || ||||| || | | |||||||| || ||||| || | Sbjct 60785 ATTTTTCAT-CTTAAGAAAGAAATTTAACCAAATCACTTTTCTACATGTTTATCACCACT 60843 Query 58488 TTACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || ||||||||||| | ||||| ||||| |||||| ||||||| || || Sbjct 60844 ACACCATGTTTACTTTGTGGTGGGTTGGTATAAAATGGGTTGCAGGGGGACA 60895 Score = 105 bits (116), Expect = 1e-17 Identities = 111/144 (77%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 58673 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTTTCCA 58732 |||||||| ||| || | || || ||||| ||||| ||||| || |||||||| ||||| Sbjct 64122 CAATTCCACATAACTCTTGGTCACACCGCCATGTCTATTTATATTGATTGCCCCTTTCCT 64181 Query 58733 AAATGGACGCA--ATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGGTA 58790 || |||| ||| ||||| || || ||||| || | ||||| || | ||||||||| Sbjct 64182 AAGTGGATGCACTATGGT--GTCATTGTCTATGCTGTCACTTTCATTGTCCTGTTTGGTA 64239 Query 58791 ACTTCTATTTTAGAACATACAAGA 58814 ||||||| | | | |||||||||| Sbjct 64240 ACTTCTACTATCGGACATACAAGA 64263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903255937492640