Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq530 127 2e-24 seq102 127 2e-24 seq148 104 2e-17 >seq530 Length=912484 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 248635 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 248577 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 248576 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 248517 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 248516 TGACGTTCTCAATGGTGTCGCTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 248457 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 248456 TCTTCACAAAGATCTGCAT 248438 Score = 125 bits (138), Expect = 7e-24 Identities = 151/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 248863 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 248805 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 248804 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 248745 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 248744 TGACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 248685 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 248684 TCTTCACAAAGATCTGCATGCCT 248662 Score = 125 bits (138), Expect = 7e-24 Identities = 151/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 250231 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 250173 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 250172 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 250113 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| | || ||||| || | ||||| ||| ||||||||||| | Sbjct 250112 TGACGTTCTCAATGGTGTCACTCGGTTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 250053 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 250052 TCTTCACAAAGATCTGCATGCCT 250030 Score = 120 bits (132), Expect = 3e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 249091 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 249033 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 249032 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 248973 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 248972 TCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 248913 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 248912 TCTTCACAAAGATCTGCATGCCT 248890 Score = 120 bits (132), Expect = 3e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 249319 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 249261 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 249260 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 249201 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 249200 TCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 249141 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 249140 TCTTCACAAAGATCTGCATGCCT 249118 Score = 120 bits (132), Expect = 3e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 249547 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 249489 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 249488 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 249429 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 249428 TCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 249369 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 249368 TCTTCACAAAGATCTGCATGCCT 249346 Score = 120 bits (132), Expect = 3e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 249775 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 249717 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 249716 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 249657 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 249656 TCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 249597 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 249596 TCTTCACAAAGATCTGCATGCCT 249574 Score = 120 bits (132), Expect = 3e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 250003 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 249945 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || ||||| || ||||| |||||| || Sbjct 249944 CGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCT 249885 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | |||||||| || | ||||| ||| ||||| ||||| | Sbjct 249884 TCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGG 249825 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 249824 TCTTCACAAAGATCTGCATGCCT 249802 >seq102 Length=3625303 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 3125438 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCA-TCTTCCAGCTGCTTGC 3125380 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| ||| || || Sbjct 3125379 CGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCT 3125320 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| | |||||||| || | ||||| ||| ||||| || || | Sbjct 3125319 TGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTGAGGG 3125260 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| || ||||||||||| Sbjct 3125259 TTTTCACAAAAATCTGCAT 3125241 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 3125894 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCAAGCTGCTTGC 3125836 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| || ||||||||||| ||| || || Sbjct 3125835 CGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATTTTAGCCT 3125776 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| | |||||||| || | ||||| ||| ||||| |||| | Sbjct 3125775 TGACATTCTCAATGGTGTCACTCGGCTCCACCTCCAAGGTGATGGTCTTGCCAGTCAAGG 3125716 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 3125715 TCTTCACAAAGATCTGCAT 3125697 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | || | | | || || |||||||||| Sbjct 3125666 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCA-TCTTCCAGCTGCTTGC 3125608 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || |||||||||||||| ||| || || Sbjct 3125607 CGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCT 3125548 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | |||||||| || | |||| ||| |||||||||| | Sbjct 3125547 TGACATTTTCAATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAAGG 3125488 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 3125487 TCTTCACAAAGATCTGCAT 3125469 >seq148 Length=2989754 Score = 104 bits (114), Expect = 2e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 148492 CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCT 148551 ||||| ||||||||| | |||||| || ||| || |||| ||||||||| || | Sbjct 2374774 CGGGGGAGCCCTCGTAGGTCTCGTACGGCCCCTGCTCCTTAGCCACTTCGCAGCTGGCTT 2374715 Query 148552 CGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGC 148611 | ||||| ||||||||||| ||||| || ||| ||| |||||| |||| || Sbjct 2374714 CTAGCGCCCCGTAGTAAATGGTCTCAAAGATCTGCTGGTTCAGCAGCTGCGCCTCTGGGC 2374655 Query 148612 TTTCGTACGGCATAC-GCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670 | || |||| |||| ||| | | | ||| ||||| || || ||||| || || | ||| Sbjct 2374654 TCTCAAACGG-ATACCGCATCAGGATAAAAGCGTCCGCCAGCCCCTGCACTCCAATGCCG 2374596 Query 148671 ATGGGCCGGTG 148681 ||||||||||| Sbjct 2374595 ATGGGCCGGTG 2374585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483337718092760