Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq548 183 4e-40 seq604 179 5e-39 seq21 167 3e-35 seq148 98.7 1e-14 >seq548 Length=871607 Score = 183 bits (202), Expect = 4e-40 Identities = 180/231 (78%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| |||| |||| ||| |||| ||| Sbjct 289074 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCCTCCAAGGCCA 289127 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| |||||||||||||| |||| ||||||| | |||||||| | Sbjct 289128 TGAGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 289187 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 |||| || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 289188 GCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTCA 289247 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 289248 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 289298 Score = 179 bits (198), Expect = 5e-39 Identities = 179/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| |||| |||| ||| |||| ||| Sbjct 294119 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCCTCCAAGGCCA 294066 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| | |||||||| | Sbjct 294065 TGAGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 294006 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 |||| || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 294005 GCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTCA 293946 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 293945 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 293895 Score = 179 bits (198), Expect = 5e-39 Identities = 187/244 (77%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||| ||||||||||| ||||| |||| |||| Sbjct 313741 TACTCCATCTATGTCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC- 313688 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| |||| ||||| ||||||||||| || ||||||||||| |||| ||||||| | Sbjct 313687 TCCTCCAAGGCCATGAGCATCATGAACTCCTTCGTCAACGACATTTTCGAGCGCATCGCC 313628 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||||| ||||| || | | |||||||||| ||| ||| | | || |||||| Sbjct 313627 GCCGAGGCCTCCCGCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATC 313568 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| | || || ||| ||| || ||||||| ||||||||||||||||||| Sbjct 313567 CAGACCGCCGTCAGGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGC 313508 Query 725139 ACCA 725142 |||| Sbjct 313507 ACCA 313504 Score = 179 bits (198), Expect = 5e-39 Identities = 179/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| |||| |||| ||| |||| ||| Sbjct 332327 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCCTCCAAGGCCA 332380 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| | |||||||| | Sbjct 332381 TGAGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 332440 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 |||| || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 332441 GCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTCA 332500 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 332501 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 332551 Score = 179 bits (198), Expect = 5e-39 Identities = 179/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| |||| |||| ||| |||| ||| Sbjct 355304 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCCTCCAAGGCCA 355251 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| | |||||||| | Sbjct 355250 TGAGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 355191 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 |||| || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 355190 GCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTCA 355131 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 355130 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 355080 Score = 179 bits (198), Expect = 5e-39 Identities = 179/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| || || |||| ||| |||| ||| Sbjct 783142 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACAC-----GGGCATC-TCCTCCAAGGCCA 783089 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| |||||||||||||| |||| ||||||| | |||||||| | Sbjct 783088 TGAGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 783029 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 | || || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 783028 GGCTCGCCCATTACAACAAGCGCTCCACCATCCCCTCCCGGGAGATCCAGACCGCCGTCA 782969 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 782968 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 782918 >seq604 Length=741506 Score = 179 bits (198), Expect = 5e-39 Identities = 179/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 |||||||||| ||||||||||| ||||| |||| |||| ||| |||| ||| Sbjct 470473 TCTACAAGGTCCTCAAGCAGGTCCACCCGGACACCGG-----CATC-TCCTCCAAGGCCA 470420 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| | |||||||| | Sbjct 470419 TGAGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCCTCCC 470360 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 |||| || | | |||||||||| ||| ||| | | || ||||||||||||||||| Sbjct 470359 GCCTCGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTCA 470300 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 470299 GGCTCCTCCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 470249 >seq21 Length=6710168 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| || || |||| || |||| ||||| Sbjct 5052462 TACAAGGTGCTGAAGCAGGTCCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 5052409 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||| | |||||| ||| Sbjct 5052408 AGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATTGCAGGGGAGGCCTCCCGC 5052349 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | || ||||||||||||||||||||| Sbjct 5052348 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTGCGC 5052289 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||||||| |||||||||| Sbjct 5052288 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCGGAGGGCACCA 5052240 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| || || |||| || |||| ||||| Sbjct 5066542 TACAAGGTGCTGAAGCAGGTCCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 5066595 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||| | |||||| ||| Sbjct 5066596 AGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATTGCAGGGGAGGCCTCCCGC 5066655 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | || ||||||||||||||||||||| Sbjct 5066656 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACCGCCGTGCGC 5066715 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||||||| |||||||||| Sbjct 5066716 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCGGAGGGCACCA 5066764 >seq148 Length=2989754 Score = 98.7 bits (108), Expect = 1e-14 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| ||||| | | | |||| | ||||| || || || |||||| ||||| Sbjct 2372465 CAGCTCTGGTACGCCATCATTGAGTCCCAGACGGAGACGGGGACCCCATACATGCTCTAC 2372524 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAA 262209 |||||| || ||||| || |||||||||||||||||||| || | | || | ||| Sbjct 2372525 AAGGACTCCTGCAACCGGAAGAGCAACCAGCAGAACCTGGGGACAATCA-AGTGCAGCAA 2372583 Query 262210 CCTGTGCACCGAGATCGT 262227 ||| |||||||||||||| Sbjct 2372584 CCTCTGCACCGAGATCGT 2372601 Score = 96.9 bits (106), Expect = 5e-14 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||||||| || |||||||| ||| ||||| || ||||| |||||||| |||||| Sbjct 2368903 TGCTTTCTGCTGTGCATGAAGGACGACAGCATCGAAGGGATCTACGACACGCTGAAGCAG 2368962 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 |||||||||||||||||| | || || ||||| || | |||| Sbjct 2368963 TGCGCGCTCATCTCCAAGTCTGCTGGGGGCATTGGGGTGGCCG 2369005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176485083679338