Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq148 98.7 1e-15 >seq148 Length=2989754 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 |||||||| | || || || || | |||| | ||| || ||||||| |||| ||| Sbjct 2372610 GTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGG 2372551 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 || |||||| |||||| | ||||||||||||||||| || ||||||||||||||||| Sbjct 2372550 TTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCCGTCTCCGTCTGG 2372491 Query 111398 GA 111399 || Sbjct 2372490 GA 2372489 Score = 82.4 bits (90), Expect = 1e-10 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| ||||||| | | || || || |||||||||||||| || || Sbjct 2376439 GTAGATGTTGCTGGTGTAGGGTTCAATGGACTCGTTGTTGCCCAAGATTTGTGCCGTCGA 2376380 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 110799 ||||||||||| || |||| || || ||||| Sbjct 2376379 AGCTGTTGGCATCGGGGCCACCAGGAGGCTGTT 2376347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627924064850400