Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq148 89.7 6e-13 seq49 87.8 2e-12 >seq148 Length=2989754 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||||| ||||| |||| || ||||||||||| || || |||||||||||||| || || Sbjct 2376347 AACAGCCTCCTGGTGGCCCCGATGCCAACAGCTTCGACGGCACAAATCTTGGGCAACAAC 2376406 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTA 105597 || | | ||||||||||||| | |||||||| Sbjct 2376407 GAGTCCATTGAACCCTACACCAGCAACATCTA 2376438 >seq49 Length=4988178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GC 94862 ||| |||| | || ||||| | ||||| || || |||||||||||| | || ||| || Sbjct 468749 GAGAGACTGGTTGCTTTTGCCTCGGTTGAAGGAATTTTCTTCTCTGGTGCTTT-TGCAGC 468691 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 ||| | ||||||||||||| |||| || ||||| ||||| |||||||| || ||||| Sbjct 468690 TATATTTTGGCTCAAGAAGAGAGGACTGATGCCGGGTCTTACTTTCTCCAATGAACTTAT 468631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583160559340760