Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq277 331 3e-85 seq119 221 4e-52 seq102 141 3e-28 seq7 122 3e-22 seq507 95.1 4e-14 seq208 87.8 5e-12 seq244 84.2 7e-11 >seq277 Length=1877347 Score = 331 bits (366), Expect = 3e-85 Identities = 822/1227 (67%), Gaps = 28/1227 (2%) Strand=Plus/Plus Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||| || || || || || || || || || || || || ||||| || ||||| Sbjct 577559 AGGTCGAGTACAAGGGAGAGCACAAGACCTTCTTCCCTGAGGAGATTTCTTCCATGGTGC 577618 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA-TGCTGTT 349615 | || ||||| |||||||| || || ||| | || | ||| | || |||||| Sbjct 577619 TGACAAAGATGAAAGAAATTGCCGAGGCTTATCTGGGACGCAAAGTC-CAGAGTGCTGTC 577677 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || || ||||| || ||||| ||||||| || || || |||||||||| | Sbjct 577678 ATCACCGTGCCTGCCTACTTCAATGACTCCCAGCGCCAAGCCACCAAGGATGCTGGCACC 577737 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || |||| | || || || | || |||||||| ||||||||||| || ||||| ||| Sbjct 577738 ATCACGGGCCTCAACGTCCTGCGCATCATTAATGAGCCCACTGCTGCTGCCATTGCCTAT 577797 Query 349736 GGGCTTGATAA-AATG--AGT-GACC--AAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || | ||||| || | ||| || | || || ||| | || || ||||| || ||| Sbjct 577798 GGTTTGGATAAGAAAGGCAGTAGAGCTGGTGAGAAGAATGTACTGATCTTTGACTTGGGT 577857 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||| || |||||||| || | | || ||||||| || || ||||| || ||| | Sbjct 577858 GGTGGCACCTTTGATGTCTCGATCTTGACCATTGAAGATGGCATCTTTGAGGTGAAATCT 577917 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || |||||||| || || ||||| || || ||||| || || | || || ||| Sbjct 577918 ACAGCAGGTGATACTCACCTGGGTGGCGAGGACTTTGACAACCGCATGGTGAGCCACTTT 577977 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || | || || ||||| ||||| ||| ||| |||| | || || ||| | || Sbjct 577978 GTGGAGGAGTTCAAGCG-CAAGCATAAGCGTGACATTGCTGGCAACAAGAGGGCAGTTCG 578036 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACT--ACCCAAACC 350026 || || | || || |||||| | || |||||| || ||| || || |||||| | Sbjct 578037 ACGGCTCCGTACAGCCTGTGAAAGGGCCAAGCGTACC--CTCAGCTCCTCCACCCAAGCT 578094 Query 350027 TCTATTGAAATTGATTCTCTTG-CTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 |||||||| ||||| || |||| |||||||| || |||| |||| || || ||||| Sbjct 578095 TCTATTGAGATTGACTC-CTTGTTTGATGGCATTGACTTCTACACATCCATCACCCGTGC 578153 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 || ||||| ||| | | |||||||| | | || | || |||||||| || | Sbjct 578154 CCGCTTTGAGGAACTCAATGCTGATCTTTTCCGTGGCACCCTTGAGCCTGTGGAGAAGGC 578213 Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 | ||||| || | |||| ||||| |||| | || || ||||| || || Sbjct 578214 CCTGCGTGATGCCAAGCTCGACAAAGGGCAGATCAATGAGATTGTGTTGGTTGGCGGCTC 578273 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTC 350265 || ||||| || || | || |||| ||| || || || ||||||||||| | || Sbjct 578274 CACCCGTATCCCTAAGATCCAGAAGTTGCTACAGGACTTCTTCAATGGCAAAGAGC--TC 578331 Query 350266 TAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 | | | || || || ||||||||||| || || ||||||||||| ||||| | || Sbjct 578332 AACAAAAGTATCAACCCTGATGAAGCTGTGGCTTACGGTGCTGCTGTGCAGGCTGCAATC 578391 Query 350324 TTATCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCA 350380 | || | ||| ||| | | || | || || | || || ||||| | ||| Sbjct 578392 CTGATGGGTGACAAG---TCTGAGAATGTGCAAGACCTTCTGCTCCTTGATGTCGCACCA 578448 Query 350381 CTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGT 350440 || || || || | || || |||||| || ||||||| | ||| | || | | Sbjct 578449 CTGTCACTGGGCATTGAGACGGCTGGTGGTGTGATGACTGCCTTGATTAAACGCAACACT 578508 Query 350441 ACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG-CCAGCGGT 350499 ||| | |||||||| || |||| || || | || | | |||| || ||| ||| || Sbjct 578509 ACTATTCCTACAAAGCAGACCCAGACCTTCACCACCTATTCAGACAACCAGAACAG-TGT 578567 Query 350500 AACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGA 350559 | || || | ||| |||||||| || ||||| || ||||| || || | Sbjct 578568 GCTGGTGCAGGTGTATGAGGGTGAACGAGCCATGACTAAGGACAATAACTTGCTAGGCAA 578627 Query 350560 ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTT 350619 ||| ||||| | ||||||||| || | || || || || || |||||| |||| Sbjct 578628 GTTTGACCTAACAGGTATTCCACCAGCACCCCGTGGTGTGCCACAAATCGAAGTCACTTT 578687 Query 350620 CGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAG 350679 || |||||| ||||||| ||| | || || || ||||| || ||| | || ||| Sbjct 578688 TGACATTGATGCAAATGGCATTCTTAACGTCACAGCAGTGGACAAAAGCACAGGCAAAGA 578747 Query 350680 TAGTAAGGTAGAAATTACTAATGATAA 350706 | ||| | |||||||||||| || Sbjct 578748 GAACAAGATTACAATTACTAATGACAA 578774 Score = 98.7 bits (108), Expect = 3e-15 Identities = 566/896 (63%), Gaps = 16/896 (2%) Strand=Plus/Minus Query 182903 TTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAAT 182962 ||| || | ||| | || || | ||| ||||| | |||| ||||| | ||||| || Sbjct 578733 TTTGTCCACTGCTGTGACGTTAAGAATGCCATTTGCATCAATGTCAAAAGTGACTTCGAT 578674 Query 182963 CTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATT 183022 ||||| ||||| || || ||||||||| || |||| ||| | |||| || Sbjct 578673 TTGTGGCACACCACGGGGTGCTGGTGGAATACCTGTTAGGTCAAACTTGCCTAGCAAGTT 578614 Query 183023 ATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAAT-AGTA-ACTGCTGGCTGA 183080 ||| || ||||| | |||| || || ||||| || || | || | |||| | ||| Sbjct 578613 ATTGTCCTTAGTCATGGCTCGTTCACCCTCATACACCTGCACCAGCACACTGTT--CTGG 578556 Query 183081 TTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGA 183140 || || ||| || | || || | | || |||||||||| | || || | Sbjct 578555 TTGTCTGAATAGGTGGTGAAGGTCTGGGTCTGCTTTGTAGGAATAGTAGTGTTGCGTTTA 578496 Query 183141 ACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCT 183200 | | ||||||| || | | || || || | || | ||| | |||||| ||||| Sbjct 578495 ATCAAGGCAGTCATCACACCACCAGCCGTCTCAATGCCCAGTGACAGTGGTGCGACATCA 578436 Query 183201 AGTAATAATAAATCTGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACA 183260 || | | | ||| || || || || | | | | |||||||| || ||| Sbjct 578435 AGGAGCAGAAGGTCTTGCACATTCTCAGACTTGTCACCCATCAGGATTGCAGCCTGCACA 578376 Query 183261 GCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGA--GATAAT-TCTTTGCCA 183317 || ||||| || || ||||||||||| ||||| || || | | | ||||||||| Sbjct 578375 GCAGCACCGTAAGCCACAGCTTCATCAGGGTTGAT---ACTTTTGTTGAGCTCTTTGCCA 578319 Query 183318 TTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAAT 183377 || || || || |||| | || || || || || | || || || || || || Sbjct 578318 TTGAAGAAGTCCTGTAGCAACTTCTGGATCTTAGGGATACGGGTGGAGCCGCCAACCAAC 578259 Query 183378 ACTACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGG 183436 || | |||| ||| | | ||| | | ||| | ||| | | || || ||||| Sbjct 578258 ACAATCTCATTGATCTGCCCTTTGTCGAGCTTG-GCATCACGCAGGGCCTTCTCCACAGG 578200 Query 183437 GTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGA 183496 || | || | || | ||| | | || || || | || | || | || Sbjct 578199 CTCAAGGGTGCCACGGAAAAGATCAGCATTGAGTTCCTCAAAGCGGGCACGGGTGATGGA 578140 Query 183497 TGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGA 183556 || | |||||||| |||| | | ||||| ||||| ||||| || | ||| || || || Sbjct 578139 TGTGTAGAAGTCAATGCCATCAAACAAGGAGTCAATCTCAATAGAAGCTTGGGTGGAGGA 578080 Query 183557 TGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGA--TCTTGGA 183614 | || | || || | |||||| ||||| | || || || | || ||||| Sbjct 578079 GCTGAGGGTACGCTTGGCCCTTTCACAGGCTGTACGGAGCCGTCGAACTGCCCTCTTG-- 578022 Query 183615 TTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAAT 183674 || | | ||| || | ||||| || | || || || | ||| || | | Sbjct 578021 TTGCCAGCAATGTCACGCTTATGCTTGCGCTTGAACTCCTCCACAAAGTGGCTCACCATG 577962 Query 183675 CTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAAT 183734 | | ||||| || || ||||| | || ||||| || || |||| ||| || ||||| Sbjct 577961 CGGTTGTCAAAGTCCTCGCCACCCAGGTGAGTATCACCTGCTGTAGATTTCACCTCAAAG 577902 Query 183735 ATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || |||||||| | || || || |||||||| || ||||||||||| ||||| Sbjct 577901 ATGCCATCTTCAATGGTCAAGATCGAGACATCAAAGGTGCCACCACCCAAGTCAAA 577846 >seq119 Length=3366018 Score = 221 bits (244), Expect = 4e-52 Identities = 468/691 (68%), Gaps = 8/691 (1%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || ||||| || || ||||| | || || || ||| || ||| Sbjct 3318469 GGCATTGATCTTGGCACTACCTACTCCTGTGTGGGTGCTTTTCAGCATGGCAAGGTGGAA 3318410 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| |||||||| |||||||| || |||||| |||||||| || || || || Sbjct 3318409 ATCATTGCCAATGATCAGGGTAACAGGACCACGCCAGGCTACGTTGCCTT-ACAGATACA 3318351 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 ||| | | ||||| ||| ||||||| || |||| || || || | ||| | ||| Sbjct 3318350 GAGAGGCTCATTGGAGATGCTGCAAATAACCAAGTGGCCATGAACCCCACAAACATGGTA 3318291 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTA 349444 |||||||| || | || |||||| | || ||| | | | || |||||| | Sbjct 3318290 TTTGATGCAAAACACCTGATTGGTCGCAGATTTGATTATGCTGTTGTCCAGTCTGATATG 3318231 Query 349445 AAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAA 349504 ||||| | ||||| |||||||| || || | || || |||| | |||| || Sbjct 3318230 AAACACTGGCCTTTCACTGTTGTG---AATGATGATGGTAGGCCAAAAGTCCAGGTGGAG 3318174 Query 349505 TATAAAGGTGAACAAAAACAATTTTTA-CCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563 || ||||| ||| | || | ||||| ||||| || || || || || || || || Sbjct 3318173 TACAAAGGAGAA-ACGAAGAGCTTTTATCCCGAGGAGATATCCTCTATAGTGCTAACCAA 3318115 Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 |||||| | || | || || || || || | ||||| ||| | || |||| || Sbjct 3318114 AATGAACAAGATAACCGAGGCGTACTTGGGAAAGACAGTTACTAACGCCACGGTTACAGT 3318055 Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683 ||||| ||||| ||||| |||| | | |||||||||||||| | |||||| || Sbjct 3318054 CCCAGCTTATTTCAATGACTCCCAACACCAGGTGACAAAAGATGCTGGAACCATTGCTGG 3317995 Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGA 349743 | ||||| || ||| |||||||| || ||||| | || |||| ||||| | || Sbjct 3317994 CCTTAATGTGCTCCAAATCATTAATGAGCCAACTGCCACTGCTTTTGCTTATGGACAGGA 3317935 Query 349744 TAAAATGAGT-GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTG 349802 |||| ||| | ||| | |||| | | || ||||| | || || || || |||| Sbjct 3317934 CAAAA-AAGTAGGTGCAGAGAGAAATGTGTTGATCTTTGACCTTGGCGGCGGCACCTTTG 3317876 Query 349803 ATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATA 349862 | || || | || || ||||||| || || |||||||| || |||| || || || | Sbjct 3317875 ACGTCTCCATCCTCACCATTGAAGATGGCATCTTTGAAGTCAAGTCAACGGCCGGGGACA 3317816 Query 349863 CACATCTTGGTGGAGAAGATTTTGATAATCG 349893 | || | ||||| || || ||||| ||||| Sbjct 3317815 CCCACTTGGGTGGCGAGGACTTTGACAATCG 3317785 Score = 127 bits (140), Expect = 6e-24 Identities = 265/390 (68%), Gaps = 6/390 (2%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || ||||| || || ||||| | || || || ||| || ||| Sbjct 3320039 GGCATTGATCTTGGCACTACCTACTCCTGTGTGGGTGCTTTTCAGCATGGCAAGGTGGAA 3319980 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| |||||||| |||||||| || |||||| |||||||| || || || || Sbjct 3319979 ATCATTGCCAATGATCAGGGTAACAGGACCACGCCAGGCTACGTTGCCTT-ACAGATACA 3319921 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 ||| | | ||||| ||| ||||||| || |||| || || || | ||| | ||| Sbjct 3319920 GAGAGGCTCATTGGAGATGCTGCAAATAACCAAGTGGCCATGAACCCCACAAACATGGTA 3319861 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTA 349444 |||||||| || | || |||||| | || ||| | | | || |||||| | Sbjct 3319860 TTTGATGCAAAACACCTGATTGGTCGCAGATTTGATTATGCTGTTGTCCAGTCTGATATG 3319801 Query 349445 AAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAA 349504 ||||| | ||||| |||||||| || || | || || |||| | |||| || Sbjct 3319800 AAACACTGGCCTTTCACTGTTGTG---AATGATGATGGTAGGCCAAAAGTCCAGGTGGAG 3319744 Query 349505 TATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAA 349563 || |||| ||| | ||| | ||||| || || || || || || ||||| || || Sbjct 3319743 TACAAAGCAGAA-ACAAAGAGCTTTTATCCTGAGGAGATATCCTCTATGGTGCTAACCAA 3319685 Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGG 349593 ||||||||| || || || || || || || Sbjct 3319684 AATGAAGGAGATAGCGGAGGCGTACTTGGG 3319655 >seq102 Length=3625303 Score = 141 bits (156), Expect = 3e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || ||||| || || || || || || || | || || |||||| Sbjct 3125452 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCT 3125393 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || |||||||| || | |||||||| || ||||| ||||| || ||| Sbjct 3125392 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 3125333 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || |||||||| || ||||| ||||| | ||| ||| || || || | || | ||| Sbjct 3125332 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTC 3125273 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || ||||| ||||||||||||||| Sbjct 3125272 TTGCCAGTGAGGGTTTTCACAAAAATCTGCATT 3125240 Score = 136 bits (150), Expect = 1e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 |||| |||||||| | | | || ||||| || || || ||||| || || || || | Sbjct 3125931 TTTAAATACCACCCCTCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGT 3125872 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||||||||| || || || |||||||| || | ||||| | Sbjct 3125871 AGTCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGT 3125812 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| || ||||| |||||||| || ||||| ||||| | ||| | Sbjct 3125811 CAGGAGGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTCG 3125752 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | ||||| || || | || || ||||| |||||||| Sbjct 3125751 GCTCCACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 3125697 >seq7 Length=9770732 Score = 122 bits (134), Expect = 3e-22 Identities = 359/549 (65%), Gaps = 6/549 (1%) Strand=Plus/Plus Query 349759 AGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAAC 349818 ||| | |||| | | || ||||| | || || || || ||||| || || | || || Sbjct 4205150 AGAGAGAAATGTGTTGATCTTTGACCTTGGCGGCGGCACCTTTGACGTCTCCATCCTCAC 4205209 Query 349819 ACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGA 349878 ||||||| || || |||||||| || |||| || || || || || | ||||| || Sbjct 4205210 CATTGAAGATGGCATCTTTGAAGTCAAGTCAACGGCCGGGGACACCCACTTGGGTGGCGA 4205269 Query 349879 AGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAAT 349938 || ||||| ||||| | || ||||| | || || || || || || | Sbjct 4205270 GGACTTTGACAATCGAATGGTCAACCATTTCATCGCCGAGTTCAAACGCAAACACAAGAA 4205329 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || |||| | ||||| || | ||||| ||||| ||||| || Sbjct 4205330 GGACATCAGTGAGAACAAGCGAGCCGTCCGTCGGCTCCGCACTGCCTGTGAGCGTGCGAA 4205389 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 |||| || | || |||| || || || ||||||||| ||||| || || |||| Sbjct 4205390 GCGTACCCTTTCCTCTAGCACTCAGGCCAGTATTGAAATCGATTCCCTGTACGAGGGCAT 4205449 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 || |||| | | || ||||| | ||||| |||||||| | | ||| || | || Sbjct 4205450 TGACTTCTATACCTCAATTACTAGAGCTCGCTTTGAAGAGCT--GAATGCTGACTTGTTC 4205507 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 | | || ||||||| ||||| |||| | ||||| || | ||| |||| Sbjct 4205508 CGTGGCACTCTGGATCCCGTGGAGAAAGCCCTGCGGGATGCGAAGCTCGATAAATCTCAG 4205567 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 | |||| | || | ||||| || || || || || || ||| | || || | || Sbjct 4205568 GTACATGACATTGTCCTGGTTGGCGGGTCCACCCGAATCCCCAAAATCCAGAAGCTGCTT 4205627 Query 350237 TCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGC 350295 || || || || |||||||||| | | ||| || | ||||| ||||||||||| || Sbjct 4205628 CAGGACTTCTTCAACGGCAAAGAACTCAACAAGAGCA-TCAATCCTGATGAAGCTGTAGC 4205686 Query 350296 ATATGGTGC 350304 || || || Sbjct 4205687 TTACGGAGC 4205695 >seq507 Length=976482 Score = 95.1 bits (104), Expect = 4e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 |||||||| ||||||||||| | || || |||||||| || ||||| |||||||| || Sbjct 343449 TTTTGAATGTTATAATCAGACAGAGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAAATC 343508 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCT 140636 ||||| || || ||||||||||||||| Sbjct 343509 AGACGCTGTTGGTCAGGAGGAATTCCT 343535 >seq208 Length=2424200 Score = 87.8 bits (96), Expect = 5e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781 |||||||||| || | |||||| ||||| || | ||||||||||| |||| ||| | Sbjct 1738292 CCTCATCTCTGCTGATCAGTTCATTGGAAAAAGTAAGCCCAGGCATTAACCCTCGCTTCT 1738233 Query 223782 TCATCCAAAATATTG-CGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAAC 223840 ||| |||||| || | ||| ||||| || ||||| ||||| ||||| ||| || || Sbjct 1738232 TCAGCCAAAAGATAGACGC-AAAAGAACCGGAAAAGAATATTCCTTCCACAGCTGCGAAG 1738174 Query 223841 GCTACTAATCGT 223852 || |||| |||| Sbjct 1738173 GCGACTACTCGT 1738162 >seq244 Length=2127258 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||| |||||||||| ||| || | ||||||| ||| | || |||||||| |||| Sbjct 1788977 CATCCCATAGAACAGTTTCATCTTCTTGCCATTTTTTTCTATAATCTCCCCAGCGCATTG 1788918 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCC 130771 |||||| | || ||||| || |||||||| ||||||||||| || || || Sbjct 1788917 ATCATGCCCTGCAAACATGCCCCCAAGCATCACAAAATCAGCACCAGCCCC 1788867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514987474205447