Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq148 87.8 2e-12 seq49 82.4 8e-11 >seq148 Length=2989754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 || |||||||| | ||||||||||| ||||||||| ||| ||||| |||||||| || Sbjct 2368997 CCAATGCCCCCAGCAGACTTGGAGATGAGCGCGCACTGCTTCAGCGTGTCGTAGATCCCT 2368938 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 ||||| |||||||||||| | ||| |||||||| Sbjct 2368937 TCGATGCTGTCGTCCTTCATGCACAGCAGAAAGCAGCT 2368900 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||| || || || |||||||| |||||||| || || |||||||| ||||| ||| Sbjct 2368900 AGCTGCTTTCTGCTGTGCATGAAGGACGACAGCATCGAAGGGATCTACGACACGCTGAAG 2368959 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||||||||| ||||||||||| | ||||| || ||| Sbjct 2368960 CAGTGCGCGCTCATCTCCAAGTCTGCTGGGGGCATTGGG 2368998 >seq49 Length=4988178 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 |||||||| | || |||||||| ||||||||||| | || ||||| || |||||| Sbjct 468737 GCTTTTGCCTCGGTTGAAGGAATTTTCTTCTCTGGTGCTTTTGCAGCTATATTTTGGCTC 468678 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || ||| | || || |||||||| || | ||||||||| || || ||| Sbjct 468677 AAGAAGAGAGGACTGATGCCGGGTCTTACTTTCTCCAATGAACTTATT 468630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548430529156560