Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq63 159 5e-34 >seq63 Length=4466547 Score = 159 bits (176), Expect = 5e-34 Identities = 295/425 (69%), Gaps = 16/425 (4%) Strand=Plus/Plus Query 13607 AGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGT-GAAAGACAGGGGGT--ATCT 13663 ||||||| ||||||||||| |||||| | ||| ||||| |||| | ||| Sbjct 2141699 AGACTACCTGAACATGACGAAGGACTGCAGGCTGTTCAAAGAAAG-CAGGAAATTCATCC 2141757 Query 13664 CGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCA 13723 ||| || |||||| || |||| || || |||||||| || || || ||| |||| Sbjct 2141758 CGTTC--CCGCTGAGCAAAGAGGAGGAGGACTTCCCCATCGCTTATTCCATGGTGGTCCA 2141815 Query 13724 CCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTA 13783 | | ||||| |||||||||||| | ||| | ||||||||||| ||||| |||||| |||| Sbjct 2141816 CGAAAAGATAGAGATGTTCGAGAGGCTCTTAAGGGCCATCTATGCCCCCCAGAACATCTA 2141875 Query 13784 CTGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGC 13843 |||||||||||||||| ||||| | | | ||| | ||| ||||||||| Sbjct 2141876 CTGCGTCCACGTGGACAAGAAGTCACCCAAAGCCTTCCAAGAAGCGGTCCAGGCCATCGC 2141935 Query 13844 CAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGAC-GTGGTGTACGGCTCCT 13902 | ||||| ||||| |||||| | | | | | ||| |||||||||| ||| | Sbjct 2141936 CTCCTGCTTTGAGAACGTCTTTCTGGCCTCCAGACAGGA-GACGGTGGTGTACGCCTCTT 2141994 Query 13903 GGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTC----CCCCGTC 13958 || || ||||| || || || | ||||||| ||||| | || | |||| Sbjct 2141995 GGTCCCGGGTGCAAGCGGATCTGAACTGCATGGAAGACCT----CCTTCGGAGCAACGTC 2142050 Query 13959 AAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAG 14018 |||| |||||| || || ||||||| ||||| || ||||||||||| ||| Sbjct 2142051 CCCTGGAAGTACCTCCTGAATACCTGCGGGACCGACTTTCCCATCAAGACCAACGCAGAG 2142110 Query 14019 ATCGT 14023 ||||| Sbjct 2142111 ATCGT 2142115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658625987434240