Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq174 105 5e-18 seq122 84.2 2e-11 >seq174 Length=2756573 Score = 105 bits (116), Expect = 5e-18 Identities = 122/163 (75%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292 || || ||||| ||||| ||||||||||| || || || || || || ||||| || || Sbjct 401085 TATTCAGCTCCAAAATGTCTCCACTGGAAGCCATAAACTGGGCCAAGATCTCCTTCCTCT 401026 Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 ||| | ||| ||| |||||| || || || | ||||||||||| |||||||| || Sbjct 401025 CTGGAATAGAATCCCTGCTTGTCTAAGAATTCACGAGAACCGTTGGCATCCCAGATTTTA 400966 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTG 30394 || || || |||| |||||||| | ||||| || |||| || Sbjct 400965 ACTCCTTTAGCAGAAAGCTCTTTTGCATTTGTAGAGCCCTGTG 400923 >seq122 Length=3335659 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 110411 TGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACC 110470 ||||||| |||| ||| || |||| | | | ||| | ||| || || || |||||||||| Sbjct 1371645 TGCTGAGTACTATGTTAATTCTGTTTTTTAAAGGGCGATTTTTCTCAGGAATGGAGAACC 1371704 Query 110471 AAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 ||||||| |||||||||| || ||||| || || ||| || Sbjct 1371705 AAGTCTTCTTACCCATTATTACTACGTTTTGTTTTCCTGTG 1371745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406242316216908