Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq102 107 1e-18 seq507 82.4 5e-11 >seq102 Length=3625303 Score = 107 bits (118), Expect = 1e-18 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||||| || | ||||| ||| |||||| || ||||| || || ||| Sbjct 3125467 CCACCTCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 3125408 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || |||||||| || | | ||| || || || || Sbjct 3125407 AGCGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3125348 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTC--TTCGCTCTCC 34656 | || |||||||| ||| ||| | || || | ||| ||||| || |||| | Sbjct 3125347 ATGCCTTCCTTGTCCTGGAT-TTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTC--C 3125291 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || |||| ||| || || || || || | |||||||||||||||||||| ||| Sbjct 3125290 ACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCATTTTG 3125237 >seq507 Length=976482 Score = 82.4 bits (90), Expect = 5e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 ||||||||||||||||||| || || || || | ||||| || |||||||| ||||| | Sbjct 343447 CCTTTTGAATGTTATAATCAGACAGAGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAAA 343506 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCC 34604 | | |||||||||||| || || | ||| Sbjct 343507 TCAGACGCTGTTGGTCAGGAGGAATTCC 343534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314676862039517