Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq530 134 1e-26 seq102 122 8e-23 seq32 87.8 2e-12 >seq530 Length=912484 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||||||||||| | || || || || ||||||||| Sbjct 250033 CATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAACCGAG 250092 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || || |||||||| ||||| || || || || Sbjct 250093 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCGGACCA 250152 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||||| || ||||||| | ||| | ||||| ||||| Sbjct 250153 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 250212 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||||| ||| | || |||| |||| || |||| ||| Sbjct 250213 CATCCAGAAGGAGTCCACCCTCCACCTGGTCCTGCGCCTGAGGGGAGGC 250261 >seq102 Length=3625303 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||||||| | || ||||| || ||||| ||| Sbjct 3125469 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCGAGT 3125528 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| || ||||| |||||||| || || || || Sbjct 3125529 GACACCATTGAAAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 3125588 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || ||||||| | ||| | || || |||||| Sbjct 3125589 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 3125648 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | || ||||| || | ||||| || Sbjct 3125649 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGAGGTGGGAT 3125698 >seq32 Length=5936712 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 |||||||||||| ||||| ||||| |||| |||||| | || ||||| || ||||| || Sbjct 2255263 CGCCATGCAGATCTTTGTGAAAACCTTGACAGGCAAGACCATCACTCTCGAGGTGGAGCC 2255322 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 |||| | || |||| ||||| |||||||| ||||||||||| Sbjct 2255323 CAGCGACACCATCGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGG 2255370 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 |||||||||||| ||||| ||||| |||| |||||| | || || ||||| ||||| || Sbjct 2259337 CGCCATGCAGATCTTTGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGCC 2259396 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 |||| | || |||| ||||| |||||||| ||||||||||| Sbjct 2259397 CAGCGACACCATCGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGG 2259444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434843653836480