Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq174 116 3e-21 >seq174 Length=2756573 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 ||||| | || ||||| || | || ||||| ||||| || ||||| || ||||| Sbjct 403377 ATGGCTTTACCACCGTGTCATGCTCTTTGCCAGTTCTATGTTTTAAATGGTGAACTGTCT 403436 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 || ||| | ||||| || || ||||||||||| ||||| || || ||||||||||| ||| Sbjct 403437 TGTCAGTTATATCAGCGTTCTGGAGACATGGGATTAGGAGTACCTTTCAACATTGCCAGT 403496 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGT 34728 ||| | ||||||| | |||||||||||||| Sbjct 403497 TACTCATTGCTCACTTCAATGATCGCTCATGT 403528 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||||||||| | ||||||| | |||||| ||||||||||| || || ||||| Sbjct 403528 ACATGAGCGATCATTGAAGTGAGCAATGAGTAACTGGCAATGTTGAAAGGTACTCCTAAT 403469 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||||| || || ||||| | ||| || ||||| || ||||| || ||||| Sbjct 403468 CCCATGTCTCCAGAACGCTGATATAACTGACAAGACAGTTCACCATTTAAAACATAGAAC 403409 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||||| || | || ||||| || | ||||| Sbjct 403408 TGGCAAAGAGCATGACACGGTGGTAAAGCCAT 403377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448185360503280