Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq530 167 5e-36 seq102 167 5e-36 seq829 84.2 5e-11 >seq530 Length=912484 Score = 167 bits (184), Expect = 5e-36 Identities = 169/219 (77%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 248649 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 248590 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 248589 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 248530 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || ||||| || |||||||| ||| || ||||| || ||||| Sbjct 248529 TGGATCTTGGCCTTGACGTTCTCAATGGTGTC---GCTCGGCTCCACCTCCAGGGTGATG 248473 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 ||||| ||||| || ||||| ||||| | |||||||||| Sbjct 248472 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTTA 248434 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 249105 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 249046 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 249045 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 248986 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| || ||||| || ||||| ||| Sbjct 248985 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 248926 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 248925 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248894 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 249333 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 249274 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 249273 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 249214 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| || ||||| || ||||| ||| Sbjct 249213 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 249154 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 249153 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249122 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 249561 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 249502 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 249501 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 249442 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| || ||||| || ||||| ||| Sbjct 249441 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 249382 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 249381 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249350 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 249789 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 249730 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 249729 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 249670 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| || ||||| || ||||| ||| Sbjct 249669 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 249610 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 249609 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249578 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 250017 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 249958 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 249957 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 249898 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| || ||||| || ||||| ||| Sbjct 249897 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 249838 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 249837 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 249806 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 248877 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 248818 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 248817 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 248758 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||||||| || ||||| || ||||| ||| Sbjct 248757 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGCTCCACCTCCAGGGTGATGGTC 248698 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 248697 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248666 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 250245 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 250186 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || || |||||| Sbjct 250185 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCC 250126 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||||||| ||| ||||| || ||||| ||| Sbjct 250125 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTCGGTTCCACCTCCAGGGTGATGGTC 250066 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 250065 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 250034 >seq102 Length=3625303 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 3125680 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCT 3125621 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| |||||||||||| Sbjct 3125620 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 3125561 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || ||||| ||||||||| || ||||| |||||||| ||| Sbjct 3125560 TGGATTTTAGCCTTGACATTTTCAATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTC 3125501 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | |||||| Sbjct 3125500 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 3125469 Score = 159 bits (176), Expect = 8e-34 Identities = 167/218 (77%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||| || | |||||| Sbjct 3125452 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTACGGCCATCT 3125393 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || || || || |||| |||||||||||| Sbjct 3125392 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 3125333 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 ||||| || || || || || ||||||||| ||| || ||||| | ||||| Sbjct 3125332 TGGATTTTAGCCTTGACATTCTCAATGGTGTCA---CTTGGCTCCACCTCCAAGGTGATG 3125276 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || ||||| || || ||||| | ||||||||| Sbjct 3125275 GTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCATTTT 3125238 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 3125908 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 3125849 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || | || ||||||||||||| |||||||||||| Sbjct 3125848 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 3125789 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || || ||||||||| || ||||| | ||||| ||| Sbjct 3125788 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTCGGCTCCACCTCCAAGGTGATGGTC 3125729 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | |||||| Sbjct 3125728 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 3125697 >seq829 Length=428434 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 ||||| |||| ||||| || | || || || || | |||||| |||||| || ||||| Sbjct 316819 TTCCACCTTCAAGCTGTTTCTCAGCAAAAATCAGATGCTGTTGGCCAGGAGAAATTCCTT 316878 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCA 211055 |||| ||||||||||| ||| |||||||| ||||| ||| Sbjct 316879 CCTTATCCTGGATCTTGGCTTTAACGTTTTCTATGGTATCA 316919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158947804870385