Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq208 109 5e-19 seq49 104 2e-17 >seq208 Length=2424200 Score = 109 bits (120), Expect = 5e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || |||||||| |||||||| || ||||| || | || |||||||| |||| ||| || Sbjct 1738290 TCATCTCTGCTGATCAGTTCATTGGAAAAAGTAAGCCCAGGCATTAACCCTCGCTTCTTC 1738231 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 |||||||| |||| ||||| || || ||||||||||| ||||| || || || || || Sbjct 1738230 AGCCAAAAGATAGACGCAAAAGAACCGGAAAAGAATATTCCTTCCACAGCTGCGAAGGCG 1738171 Query 4692 ACTAATCG 4699 |||| ||| Sbjct 1738170 ACTACTCG 1738163 >seq49 Length=4988178 Score = 104 bits (114), Expect = 2e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621 ||||| |||| ||||||||||| ||||| || || || || | || ||||| | || Sbjct 468609 ATGCATTACTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGACCCGGCATCAGTCC 468668 Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681 |||||| || |||||||||||||| ||||| | ||||| ||||| || ||||| || | Sbjct 468669 TCTCTTCTTGAGCCAAAATATAGCTGCAAAAGCACCAGAGAAGAAAATTCCTTCAACCGA 468728 Query 4682 GGCAAACGCTAC 4693 |||||| || || Sbjct 468729 GGCAAAAGCAAC 468740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426978041033417