Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq174 96.9 3e-15 >seq174 Length=2756573 Score = 96.9 bits (106), Expect = 3e-15 Identities = 120/163 (74%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || ||||| ||||| ||||| ||||| || || || || || || ||||| || || Sbjct 401085 TATTCAGCTCCAAAATGTCTCCACTGGAAGCCATAAACTGGGCCAAGATCTCCTTCCTCT 401026 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 ||| | ||| ||| |||||| || || || | ||||||||||| |||||||| || Sbjct 401025 CTGGAATAGAATCCCTGCTTGTCTAAGAATTCACGAGAACCGTTGGCATCCCAGATTTTA 400966 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTG 27660 || || || | || |||||||| | ||||| || |||| || Sbjct 400965 ACTCCTTTAGCAGAAAGCTCTTTTGCATTTGTAGAGCCCTGTG 400923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369445283179619