Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq530 147 2e-30 seq102 132 3e-26 seq32 84.2 2e-11 >seq530 Length=912484 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 249124 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 249065 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 249064 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 249005 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| | | Sbjct 249004 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTCGGCT 248946 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 248945 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 248893 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 249352 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 249293 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 249292 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 249233 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| | | Sbjct 249232 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTCGGCT 249174 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 249173 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 249121 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 249580 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 249521 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 249520 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 249461 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| | | Sbjct 249460 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTCGGCT 249402 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 249401 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 249349 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 249808 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 249749 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 249748 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 249689 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| | | Sbjct 249688 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTCGGCT 249630 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 249629 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 249577 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 250036 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 249977 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 249976 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 249917 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| | | Sbjct 249916 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCAC-GTTCTCAATGGTGTCACTCGGCT 249858 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 249857 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 249805 Score = 145 bits (160), Expect = 5e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 248668 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 248609 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 248608 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 248549 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||| | |||| | ||||||||| | | Sbjct 248548 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTGAC-GTTCTCAATGGTGTCGCTCGGCT 248490 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 248489 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 248438 Score = 143 bits (158), Expect = 2e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || ||| |||||| ||||||||||| || Sbjct 248896 CATGCCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 248837 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| ||||||||||||| | |||||| || | Sbjct 248836 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGG 248777 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||| | |||| | |||||||| | | Sbjct 248776 GGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTGAC-GTTCTCAATGGTGTCACTCGGCT 248718 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || || ||||| ||||| ||||||||||| ||||| |||||| Sbjct 248717 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 248665 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || |||||||| || ||| |||||| ||||||||||| |||| | Sbjct 250260 CCTCCCCTCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 250201 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||||||||||| | |||||| || | || Sbjct 250200 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 250141 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| ||||| ||| | |||| | |||||||| | |||||| Sbjct 250140 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGAC-GTTCTCAATGGTGTCACTCGGTTCCAC 250082 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || || ||||| || || ||||||||||| ||||| |||||| Sbjct 250081 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 250033 >seq102 Length=3625303 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3125471 CATCCCACCTCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3125412 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || | || ||||||||||| ||||||||||||| | ||||||||||| Sbjct 3125411 GGAAAGCGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGG 3125352 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| || || ||| | | | |||||||| | || Sbjct 3125351 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTC 3125292 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||| || |||||||| ||||| || || ||||| Sbjct 3125291 CACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAAATCTGCAT 3125241 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3125699 CATCCCACCTCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3125640 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || | || ||||||||||| ||||||||||||| | |||||| |||| Sbjct 3125639 AGAGAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGG 3125580 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| || || ||| | || | |||||||| | || Sbjct 3125579 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTTTCAATGGTGTCACTCGGCTC 3125520 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||| || || | ||||||||| ||||| ||||| Sbjct 3125519 CACCTCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 3125469 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||||| | || || ||||| || ||| |||||| ||||||||||| ||| Sbjct 3125926 ATACCACCCCTCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 3125867 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || || |||||||| ||||||||||||| | |||||| || | | Sbjct 3125866 GAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGA 3125807 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | ||||||||| ||| || || ||| | | | |||||||| | ||| Sbjct 3125806 GGAATACCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTCGGCTCC 3125747 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || | ||||||||| ||||| ||||| Sbjct 3125746 ACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 3125697 >seq32 Length=5936712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 44148 CCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| |||| || |||| | || |||||||||||||| |||||| Sbjct 2259969 CCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAG 2259910 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 |||| ||||||||| || | ||| | |||| || Sbjct 2259909 ATCAGACGCTGCTGGTCAGGAGGGATACCTGCC 2259877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359930077871133