Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq446 98.7 8e-16 >seq446 Length=844205 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| || |||||||| || | | || ||||||||| || ||| || ||| | || Sbjct 571363 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGCGAACTCTC 571304 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || |||| ||| | || || || ||||| || || ||||| |||||||| ||| | Sbjct 571303 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGTGTACCATTCAACATAGCTAG 571244 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGG 19129 ||| |||||||||| | || | || ||||||||||| Sbjct 571243 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAGG 571205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399249451032600