Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq446 86.0 7e-12 >seq446 Length=844205 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||||| | ||| | || || || || || || ||||||||||| || || ||||| ||| Sbjct 571214 TGGGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAATGGTACACCCAGTCCC 571273 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 ||||| || || ||||| || ||||| || ||||| || || | ||| |||||| Sbjct 571274 ATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCATTTAAAATGTAAAACTGG 571333 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGC 145913 || || ||||| || ||||| ||||| || Sbjct 571334 CAGAGAGCATGGCATGGAGGCAGAGCCATTGC 571365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589691184811200