Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq446 114 1e-20 >seq446 Length=844205 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||| |||||||||| ||| || ||||| |||||| || ||| ||| | || Sbjct 571363 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGCGAACTCTC 571304 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| | ||||| || || | || |||||||||||||| || ||||| || || || Sbjct 571303 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGTGTACCATTCAACATAGCTAG 571244 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 |||| | || ||||| | |||||||| |||||||||| Sbjct 571243 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAG 571206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398929654924600