Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq39 125 6e-24 seq4804 113 4e-20 seq4617 111 1e-19 >seq39 Length=347859 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | |||| ||| || ||| ||||||||| |||||||||||| Sbjct 5625 CCACCTCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 5684 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || ||||| ||||| || || || |||| || ||| ||||||||||| Sbjct 5685 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 5744 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 5745 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 5804 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| |||||||||||||| ||||| Sbjct 5805 TCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 5851 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | |||| ||| || ||| ||||||||| |||||||||||| Sbjct 5853 CCACCTCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 5912 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || ||||| ||||| || || || |||| || |||||| |||||||| Sbjct 5913 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGA 5972 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 5973 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 6032 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| ||||| |||||||| ||||| Sbjct 6033 TCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6079 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | |||| ||| || ||| ||||||||| |||||||||||| Sbjct 5397 CCACCCCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 5456 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || ||||| ||||| || || || |||| || ||| ||||||||||| Sbjct 5457 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 5516 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 5517 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 5576 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || || ||||| |||| |||||||||||||| ||||| Sbjct 5577 TCAAGAGTTATGGTTTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5623 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | |||| ||| || ||| ||||||||| |||||||||||| Sbjct 6081 CCACCCCTCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6140 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| ||||| || |||| || ||| ||||| ||||| Sbjct 6141 AGCGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 6200 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 6201 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACC 6260 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| |||||||||||||| ||||| Sbjct 6261 TCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 6307 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | || | || || ||| ||||||||| |||||||||||| Sbjct 6309 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6368 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || ||||| ||||| || || || |||| || ||| ||||||||||| Sbjct 6369 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 6428 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | ||||||| Sbjct 6429 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 6488 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| ||||| |||||||| ||||| Sbjct 6489 TCCAAGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6535 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | || | || || ||| ||||||||| |||||||||||| Sbjct 6993 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7052 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || ||||| ||||| ||||| || |||| || |||||| |||||||| Sbjct 7053 AGTGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGTTGATCGGGAGGA 7112 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 7113 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 7172 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || || || || |||| |||||||||||||| ||||| Sbjct 7173 TCTAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 7219 Score = 113 bits (124), Expect = 4e-20 Identities = 151/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 7240 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 7299 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| || || || |||| || ||| ||||||||||| | || ||||||||| | Sbjct 7300 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGA 7359 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||||||||||| ||| || || || | Sbjct 7360 TCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTTTTCC 7419 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | |||| ||||| |||||||| |||||| Sbjct 7420 CGGTCAAGGTCTTTACAAAGATCTGCATG 7448 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||| || || ||| | || |||| Sbjct 7468 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGAGAGAGTGCGGCCATCTTCCA 7527 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| || || || |||| || ||| ||||||||||| | || ||||||||| | Sbjct 7528 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGA 7587 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||||||||| | ||| || || || | Sbjct 7588 TCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTTTTCC 7647 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 | |||| ||||||||||||||| ||||| || Sbjct 7648 CGGTCAAAGTCTTCACAAAGATCTGCATTTT 7678 Score = 105 bits (116), Expect = 5e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| ||||||||||| ||| ||| | || |||| Sbjct 6784 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGGCCATCTTCCA 6843 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| || || || |||| || ||| ||||||||||| | || ||||||||| | Sbjct 6844 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGA 6903 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | |||||||| | || || || |||| Sbjct 6904 TCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACCTCAAGAGTTATGGTTTTGC 6963 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||| |||||||||||||| ||||| Sbjct 6964 CAGTCAAGGTCTTCACAAAGATCTGCAT 6991 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 6556 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 6615 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| ||||| || |||| || ||| ||||| ||||| | || ||||||||| | Sbjct 6616 GCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGA 6675 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | |||| | ||||||||| | ||| || || || | Sbjct 6676 TCTTGGCCTTGACGTTTTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTTTTCC 6735 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | |||| ||||| |||||||| |||||| Sbjct 6736 CGGTCAAGGTCTTTACAAAGATCTGCATG 6764 >seq4804 Length=43647 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | || | || || ||| ||||||||| |||||||||||| Sbjct 2127 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2068 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| ||||| || |||| || ||| ||||||||||| Sbjct 2067 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 2008 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | ||||||| Sbjct 2007 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACC 1948 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | ||| || || || || |||| ||||| |||||||| ||||| || Sbjct 1947 TCTAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCATTTT 1898 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | |||| ||| || ||| ||||||||| ||||||||||| Sbjct 5491 CCACCCCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAG 5432 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| ||||| || || || |||| || |||||| |||||||| Sbjct 5431 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGA 5372 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | | |||| | |||||| Sbjct 5371 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 5312 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| |||||||||||||| ||||| Sbjct 5311 TCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 5265 >seq4617 Length=95303 Score = 111 bits (122), Expect = 1e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 85314 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 85255 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| |||| || ||| || || ||||| | || ||||| ||| | Sbjct 85254 GCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGA 85195 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||||||||||| ||| || ||||| | Sbjct 85194 TCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCC 85135 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 | |||| |||||||||||||| ||||| || Sbjct 85134 CAGTCAAGGTCTTCACAAAGATCTGCATTTT 85104 Score = 105 bits (116), Expect = 5e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 85770 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 85711 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| |||| || ||| || || ||||| | || ||||||||| | Sbjct 85710 GCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 85651 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | |||||||||| ||| || ||||| | Sbjct 85650 TCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTCC 85591 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||| ||||| |||||||| ||||| Sbjct 85590 CAGTCAAGGTCTTGACAAAGATCTGCAT 85563 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || || || |||||||||||| || ||| | || ||||| || || |||||||| Sbjct 85981 TCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAG 85922 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || |||||| || ||||| | || ||||||||| || || ||| || | Sbjct 85921 ATCAGCCTCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 85862 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||||||||| ||| || ||||| || |||| ||||| ||| Sbjct 85861 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACA 85802 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 85801 AAGATCTGCAT 85791 Score = 102 bits (112), Expect = 6e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| ||||||||||| || ||| | || |||| Sbjct 86454 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCA 86395 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || ||||| |||| || ||| || || ||||| | || ||||||||| | Sbjct 86394 GCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 86335 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||||||||||| ||| || ||||| | Sbjct 86334 TCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCC 86275 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||| ||||| |||||||| ||||| Sbjct 86274 CAGTCAAGGTCTTGACAAAGATCTGCAT 86247 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | || || | || || ||| ||||||||| |||||||||||| Sbjct 86245 CCACCCCTCAGACGTAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 86186 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || |||| ||||| ||||| || |||| || ||| || || ||||| Sbjct 86185 AGGGTGCGGCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGA 86126 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| ||| || || ||| || | | | | |||| | |||||| Sbjct 86125 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACC 86066 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || ||||| || |||| ||||| |||||||| ||||| Sbjct 86065 TCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 86019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 86682 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 86623 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || ||||| |||| || ||| || || ||||| | || ||||||||| | Sbjct 86622 GCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 86563 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | || ||||||| ||| || ||||| | Sbjct 86562 TCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCTACCTCCAGGGTGATGGTCTTCC 86503 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||| ||||| |||||||| ||||| Sbjct 86502 CAGTCAAGGTCTTGACAAAGATCTGCAT 86475 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || || || |||||||||||| || ||| | || ||||| || || |||||||| Sbjct 85525 TCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAG 85466 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || || ||||| | || ||||||||| || || ||| || | Sbjct 85465 ATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 85406 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | |||||||||| ||| || ||||| || |||| ||||| ||| Sbjct 85405 TCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACA 85346 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 85345 AAGATCTGCAT 85335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394823472897880