Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq2078 86.0 3e-12 >seq2078 Length=110154 Score = 86.0 bits (94), Expect = 3e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 3619 TGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTT 3678 |||| || | ||||||||||| ||||| ||||| || ||||||||| |||||| | | Sbjct 81944 TGAACTGCTGTATTTTGCTGATGTATGTGCTGGCCCTGGTGGTTTCTCAGAATATGTCCT 82003 Query 3679 ATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTT 3738 ||||| ||||| ||| || ||||||| ||| ||||| ||| | | ||||||||| Sbjct 82004 CTGGAGGAAGAAGTGGCATGCAAAAGGTTTTGGGATGACCTTAAAAGGACCAAATGATTT 82063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276377390416840