Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3825 111 3e-19 >seq3825 Length=175568 Score = 111 bits (122), Expect = 3e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 |||| || ||||||||| ||||||||||| ||||| | ||||| || | || || |||| Sbjct 100602 ACCCGCTTCATGAAGAGATCCGGGATCCAGAGCGCGTAGAAGAGGTCCCGGGCCCTCTGC 100543 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 || ||| ||| |||| ||| |||| || | || ||||| ||||| |||||| ||| Sbjct 100542 TCTTCCTTCCCGGTGTTCTTCTTCAGGTCAAGGAAATCAAAGATGTCCAAGTGCCAGGGC 100483 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| |||| ||| | || ||||||| || Sbjct 100482 TCCAGGTAGATGGCGAAGGCCCCGGGTCTCT 100452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928237799923200