Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4804 125 5e-24 seq39 125 5e-24 seq4617 116 2e-21 seq325 84.2 1e-11 >seq4804 Length=43647 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 2127 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2068 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| | |||||| || | || Sbjct 2067 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 2008 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| ||||||||| | ||||| Sbjct 2007 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCGCTGGGCTCCAC 1949 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || ||||||||||||||||| Sbjct 1948 CTCTAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 1901 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| ||| | |||| || |||||| ||| || || |||||||| || || Sbjct 5492 ACCACCCCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGA 5433 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || |||| ||||| || ||||| |||| | ||| ||||| | || Sbjct 5432 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGG 5373 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || || | | | ||| |||||| || | ||||| Sbjct 5372 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGTTCCA 5314 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || || || |||||||||||||| Sbjct 5313 CCTCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 5265 >seq39 Length=347859 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | |||| || |||||| ||| || || |||||||| |||||| Sbjct 5853 CCACCTCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 5912 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| ||||| || ||||| |||| | ||| ||||| | || Sbjct 5913 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGA 5972 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | || | |||||| || | |||||| Sbjct 5973 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCAC 6031 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || ||||||||||||||||| Sbjct 6032 CTCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6079 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | |||| || |||||| ||| || || |||||||| |||||| Sbjct 5625 CCACCTCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 5684 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 5685 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 5744 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | || | |||||| || | |||||| Sbjct 5745 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCAC 5803 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || || |||||||||||||| Sbjct 5804 CTCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 5851 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 6993 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7052 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| ||||| |||||||| |||| | ||| ||||| | || Sbjct 7053 AGTGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGTTGATCGGGAGGA 7112 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | || | |||||| || | |||||| Sbjct 7113 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCAC 7171 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || || |||||||||||||| Sbjct 7172 CTCTAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 7219 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| ||| | |||| || |||||| ||| || || |||||||| ||||| Sbjct 5396 ACCACCCCTCAGACGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 5455 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 5456 GAGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGG 5515 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | || | || | |||||| || | ||||| Sbjct 5516 AATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCA 5574 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || ||||| || || || || || |||||||||||||| Sbjct 5575 CCTCAAGAGTTATGGTTTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5623 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | |||| || || ||| ||| || || |||||||| |||||| Sbjct 6081 CCACCCCTCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6140 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| | |||||| || | || Sbjct 6141 AGCGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 6200 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | |||||| Sbjct 6201 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGTTCCAC 6259 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || || |||||||||||||| Sbjct 6260 CTCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTCACAAAGATCTGCAT 6307 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 6309 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6368 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 6369 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 6428 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | || | || | |||||| || | ||||| Sbjct 6429 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 6487 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || ||||||||||||||||| Sbjct 6488 CTCCAAGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6535 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 6537 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6596 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| | |||||| || | || Sbjct 6597 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 6656 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | ||||| Sbjct 6657 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTTTCAATGGTGTCACTGGGCTCCAC 6715 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || ||||||||||||||||| Sbjct 6716 CTCTAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6763 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 7221 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 7280 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 7281 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 7340 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | ||||| Sbjct 7341 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCCAC 7399 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || ||||||||||||||||| Sbjct 7400 CTCCAGGGTGATGGTTTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 7447 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | ||| || ||| ||| || || |||||||| || ||| Sbjct 6765 CCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAG 6824 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 6825 AGTGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 6884 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | |||| || | |||||| || | |||||| Sbjct 6885 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACATTCTCAATGGTGTCACTGGGTTCCAC 6943 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || ||||| || || || || || |||||||||||||| Sbjct 6944 CTCAAGAGTTATGGTTTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 6991 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | ||| || ||| ||| || || ||||||||||| ||| Sbjct 7449 CCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGAG 7508 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || ||||| |||| | |||||| || | || Sbjct 7509 AGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 7568 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | |||| || | ||||||||| | ||||| Sbjct 7569 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCAC 7627 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || || || |||||||||||||| Sbjct 7628 CTCTAGGGTGATGGTTTTCCCGGTCAAAGTCTTCACAAAGATCTGCAT 7675 >seq4617 Length=95303 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||||| || | ||| || ||| ||| || || |||||||| |||||| Sbjct 86245 CCACCCCTCAGACGTAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 86186 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| ||||| |||||||| |||| | ||||||||| | || Sbjct 86185 AGGGTGCGGCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGA 86126 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| || || || || || | | | ||| |||||| || | |||||| Sbjct 86125 ATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGTTCCAC 86067 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 86066 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 86019 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| |||||||| |||||||| |||||| Sbjct 85561 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAG 85502 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| | ||||||||| | || Sbjct 85501 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGA 85442 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | |||||| Sbjct 85441 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGTTCCAC 85383 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 85382 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 85335 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 85789 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 85730 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| | ||||||||| | || Sbjct 85729 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGA 85670 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | |||||| Sbjct 85669 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGTTCCAC 85611 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 85610 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 85563 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 85333 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 85274 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| | ||||||||| | || Sbjct 85273 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGA 85214 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| || || || || || | ||| ||| |||||| || | ||||| Sbjct 85213 ATGCCTTCCTTATCCTGGATCTTAGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCCAC 85155 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 85154 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 85107 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| |||||||| |||||||| |||||| Sbjct 86017 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAG 85958 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| | ||| ||||| | || Sbjct 85957 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGATCAGGAGGA 85898 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | ||||| Sbjct 85897 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGCTCCAC 85839 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 85838 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 85791 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| |||||| Sbjct 86701 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 86642 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || |||| | ||||||||| | || Sbjct 86641 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGA 86582 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | ||| || Sbjct 86581 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGTTCTAC 86523 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 86522 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 86475 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | || | ||| || ||| ||| || || |||||||| || ||| Sbjct 86473 CCACCCCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 86414 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || |||| | ||||||||| | || Sbjct 86413 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGA 86354 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | ||||| Sbjct 86353 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGCTCCAC 86295 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || |||||||||||||| Sbjct 86294 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 86247 >seq325 Length=2787329 Score = 84.2 bits (92), Expect = 1e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || || |||||||| |||||||||||| | || |||| |||||||| ||||| | Sbjct 1512163 CTTTCTGGATATTGTAATCTGAGAGTGTGCGTCCATCTTCCAGCTGTTTTCCCGCAAAGA 1512104 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCT 33648 ||| |||||||||||| | || | |||| Sbjct 1512103 TCAGACGCTGCTGATCAGGAGGAATACCT 1512075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328494562137600