Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq446 96.9 4e-15 >seq446 Length=844205 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| || || ||||| | ||| | || || || || || || ||||||||||| Sbjct 571198 CTTCAAGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAA 571257 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || || | ||| || ||||| || ||||| || || | Sbjct 571258 TGGTACACCCAGTCCCATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCATT 571317 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | |||||||||||| || ||||| || ||||| ||||| || Sbjct 571318 TAAAATGTAAAACTGGCAGAGAGCATGGCATGGAGGCAGAGCCATTGC 571365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583106690592000