Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq349 104 2e-17 >seq349 Length=2924978 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 ||||| || ||||| ||||||||||| ||||||||||| | ||||| || |||||||| Sbjct 2688339 GTTGTGGAAGAGCTGTTCCGAGATGGAGTAAACTGGGGAAGGATTGTGGCATTCTTTGAA 2688280 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 |||||||| | ||||||||||||| |||| | | | || | | || || |||| Sbjct 2688279 TTTGGTGGCATGCTGTGTGTGGAAAGTGTCAGTCGGGAGATGTCACCTCTGGTGGACAGT 2688220 Query 3365 ATTGCCGCGTGGATGACAGA 3384 ||||| | |||||||| || Sbjct 2688219 ATTGCTGAATGGATGACTGA 2688200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414212710925920