Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq39 150 4e-31 seq4617 143 6e-29 seq4804 141 2e-28 seq4813 100 7e-16 >seq39 Length=347859 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| |||||||| | | ||| | ||||| Sbjct 7463 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGAGAGAGTGCGGCCATC 7522 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 7523 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 7582 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| || |||||||| || ||||| |||| ||||| || Sbjct 7583 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGT 7642 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||||||| || | || | |||||||| Sbjct 7643 TTTCCCGGTCAAAGTCTTCACAAAGATCTGCATTTT 7678 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||||||||| || || |||| ||||| |||| | || | ||||| Sbjct 5867 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 5926 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | ||||| ||||| ||||| ||||||||||| Sbjct 5927 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGAATGCCTTCCTTGTC 5986 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || |||||| || | ||||| || Sbjct 5987 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGT 6046 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||| || | ||||| Sbjct 6047 TTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6079 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||||||||| || || |||| ||||| |||| | || | ||||| Sbjct 5411 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 5470 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 5471 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 5530 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || |||||| || | || || || Sbjct 5531 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCAAGAGTTATGGT 5590 Query 225681 CTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 5591 TTTGCCAGTCAAGGTCTT 5608 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||||||||| || || |||| ||||| |||| | || | ||||| Sbjct 5639 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 5698 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 5699 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 5758 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || |||||| || | ||||| || Sbjct 5759 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGT 5818 Query 225681 CTTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 5819 TTTCCCGGTCAAGGTCTT 5836 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 6323 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 6382 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 6383 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 6442 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || ||||| || || ||||| || Sbjct 6443 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGT 6502 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||| || | ||||| Sbjct 6503 TTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6535 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 7235 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 7294 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 7295 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 7354 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| || |||||||| || ||||| || | ||||| || Sbjct 7355 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 7414 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||| || | ||||| Sbjct 7415 TTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 7447 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 6551 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 6610 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| || | || ||||| || ||||| ||||||||||| Sbjct 6611 TTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 6670 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || ||| |||||||| || ||||| |||| ||||| || Sbjct 6671 CTGGATCTTGGCCTTGACGTTTTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGT 6730 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||| || | ||||| Sbjct 6731 TTTCCCGGTCAAGGTCTTTACAAAGATCTGCAT 6763 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| || | | || | ||||| Sbjct 6779 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGGCCATC 6838 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | || |||||||| ||||| ||||||||||| Sbjct 6839 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 6898 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| || |||||||| || |||||| || | || || || Sbjct 6899 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACCTCAAGAGTTATGGT 6958 Query 225681 CTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 6959 TTTGCCAGTCAAGGTCTT 6976 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 7007 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 7066 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| || | ||||| ||||| ||||| ||||||||||| Sbjct 7067 TTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGTTGATCGGGAGGAATGCCTTCCTTGTC 7126 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || |||||| |||| ||||| || Sbjct 7127 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCTAGGGTGATGGT 7186 Query 225681 CTTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 7187 TTTCCCGGTCAAGGTCTT 7204 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 6095 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCATC 6154 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| || | || ||||| || ||||| ||||||||||| Sbjct 6155 TTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 6214 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| || |||||||| || |||||| || | ||||| || Sbjct 6215 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGT 6274 Query 225681 CTTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 6275 TTTCCCGGTCAAGGTCTT 6292 >seq4617 Length=95303 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| |||||||||||||||| ||||| |||| | || | |||||| Sbjct 85546 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 85487 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || || || || ||||| ||||||||||| Sbjct 85486 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 85427 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || |||||| || | ||||| ||| Sbjct 85426 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTC 85367 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 85366 TTCCCAGTCAAGGTCTT 85350 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| |||||||||||||||| ||||| |||| | || | |||||| Sbjct 86002 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 85943 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | ||||| || || ||||| ||||||||||| Sbjct 85942 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 85883 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || ||||| || | ||||| ||| Sbjct 85882 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 85823 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 85822 TTCCCAGTCAAGGTCTT 85806 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| ||||| || || |||| ||||| |||| | || | |||||| Sbjct 86914 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 86855 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| |||| || || || || ||||| ||||||||||| Sbjct 86854 TCCAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 86795 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||| || ||||| || ||| || || | ||||| ||| Sbjct 86794 TGGATCTTAGCCTTGACGTTTTCAATAGTGTCACTGGGTTCTACCTCCAGGGTGATGGTC 86735 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || |||||||| || Sbjct 86734 TTCCCAGTCAAAGTCTT 86718 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| ||||| || || |||| ||||| |||| | || | |||||| Sbjct 85774 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 85715 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || || || || ||||| ||||||||||| Sbjct 85714 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 85655 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || |||||| || | ||||| ||| Sbjct 85654 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTC 85595 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 85594 TTCCCAGTCAAGGTCTT 85578 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| ||||| || || |||| ||||| |||| | || | |||||| Sbjct 86686 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 86627 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || | || || || || ||||| ||||||||||| Sbjct 86626 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 86567 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || ||| || || | ||||| ||| Sbjct 86566 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCTACCTCCAGGGTGATGGTC 86507 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 86506 TTCCCAGTCAAGGTCTT 86490 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| ||||| || || |||| ||||| || | | || | |||||| Sbjct 86458 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 86399 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || | || || || || ||||| ||||||||||| Sbjct 86398 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 86339 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || ||||| || | ||||| ||| Sbjct 86338 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 86279 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 86278 TTCCCAGTCAAGGTCTT 86262 >seq4804 Length=43647 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 2113 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2054 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || || || ||||| || | || |||||||| ||||| ||||||||||| Sbjct 2053 TTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 1994 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| || |||||||| || ||||| |||| ||||| || Sbjct 1993 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGT 1934 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || ||||| || |||| || | |||||||| Sbjct 1933 TTTCCCGGTCAAGGTCTTTACAAAGATCTGCATTTT 1898 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||||||||| || || |||| ||||| || | | ||| | ||||| Sbjct 5477 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATC 5418 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || ||||| ||||| || | ||||| ||||| ||||| ||||||||||| Sbjct 5417 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGAATGCCTTCCTTGTC 5358 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| || |||||| || | ||||| || Sbjct 5357 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGT 5298 Query 225681 CTTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 5297 TTTCCCGGTCAAGGTCTT 5280 >seq4813 Length=31911 Score = 100 bits (110), Expect = 7e-16 Identities = 117/156 (75%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 7718 CTTCCTTATT--TCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATAC 7775 || ||| ||| ||||| |||||||| || || | |||| ||| ||||||||||||| | Sbjct 28848 CTACCTGATTAGTCTAGTTTTGGTAAGGTTTTTCGTGTTACATCGAATTAAACCACATGC 28789 Query 7776 TCCACCGCTTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTAC 7835 ||||||||| || | |||||| || |||| ||||| | ||| || |||| ||| Sbjct 28788 CCCACCGCTTGTAAGGACCCCCGTCAATTCCTTTAAGTTTCATTCTTTCGAACGTACTAC 28729 Query 7836 TCAGGTGGAATA-TTTACGCGTTAGCTTAATTAATA 7870 |||| |||| | ||| |||||||||||| |||| Sbjct 28728 CCAGGCGGAAAACTTTTAGCGTTAGCTTAAAAAATA 28693 Score = 100 bits (110), Expect = 7e-16 Identities = 117/156 (75%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 7718 CTTCCTTATT--TCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATAC 7775 || ||| ||| ||||| |||||||| || || | |||| ||| ||||||||||||| | Sbjct 30116 CTACCTGATTAGTCTAGTTTTGGTAAGGTTTTTCGTGTTACATCGAATTAAACCACATGC 30175 Query 7776 TCCACCGCTTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTAC 7835 ||||||||| || | |||||| || |||| ||||| | ||| || |||| ||| Sbjct 30176 CCCACCGCTTGTAAGGACCCCCGTCAATTCCTTTAAGTTTCATTCTTTCGAACGTACTAC 30235 Query 7836 TCAGGTGGAATA-TTTACGCGTTAGCTTAATTAATA 7870 |||| |||| | ||| |||||||||||| |||| Sbjct 30236 CCAGGCGGAAAACTTTTAGCGTTAGCTTAAAAAATA 30271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191732397882320