Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2308 100 3e-16 >seq2308 Length=189564 Score = 100 bits (110), Expect = 3e-16 Identities = 102/131 (78%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 16625 TCTTCATCCAATGAAAATGTGTTATCTT--GTTTATGA-ACAACACCCATTCTTTGGTAA 16681 ||| ||||||| | |||| ||||||| | ||| | |||||||| ||||| || Sbjct 133865 TCTGCATCCAAAGTGAATGAGTTATCTGCAGGGCTTGACATCACACCCATCCTTTGATAT 133924 Query 16682 TCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAA 16741 || | || || ||||| || |||||||||||||| || ||||| ||||||||||||||| Sbjct 133925 TCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCTTCCAGAGAGATATTCTCCATGAAA 133984 Query 16742 TCAAAAGGATT 16752 ||||| ||||| Sbjct 133985 TCAAATGGATT 133995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||| || || || || |||||||| || | || ||||| |||||||||| Sbjct 135512 CCTCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCT 135571 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||||||||| | || || || ||||||||||| || || || || | ||||| | Sbjct 135572 TCAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 135631 Query 17106 CGATTAATCGTTC 17118 | | || |||||| Sbjct 135632 CTACTACTCGTTC 135644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517292565486840