Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2308 100 3e-16 >seq2308 Length=189564 Score = 100 bits (110), Expect = 3e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16470 TTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCT 16529 ||||||| |||||||| |||||||| ||||||||||| || ||||| || ||||| |||| Sbjct 137491 TTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTTTTCCATGGCAATCT 137550 Query 16530 GAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 | || |||||||| || || || || | | ||||||||| Sbjct 137551 GGAAGCCATAGAAACAGCGGGCTTCTGTGACTTGTACTTC 137590 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 3/132 (2%) Strand=Plus/Plus Query 15862 ATCTACATCCAATGAAAATGTGTTATCTT---GTTTAGAAGCAACACCCATTCTTTGGTA 15918 |||| ||||||| | |||| ||||||| | | || |||||||| ||||| || Sbjct 133864 ATCTGCATCCAAAGTGAATGAGTTATCTGCAGGGCTTGACATCACACCCATCCTTTGATA 133923 Query 15919 ATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAA 15978 || | || || ||||| |||||||||||||| || || | ||| ||||| ||||| || Sbjct 133924 TTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCTTCCAGAGAGATATTCTCCATGAA 133983 Query 15979 ATCAAAGGGATT 15990 |||||| ||||| Sbjct 133984 ATCAAATGGATT 133995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||| || || || || || |||||||| | || |||||| ||||||||||| Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 | ||| ||||| | ||||| || || |||||||| || || ||||| | ||||| || Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 135633 Query 16346 ATTAATCGTTC 16356 | || |||||| Sbjct 135634 ACTACTCGTTC 135644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511164363107160