Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq5584 104 2e-17 seq2821 100 2e-16 >seq5584 Length=77330 Score = 104 bits (114), Expect = 2e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| |||||||||||||| || |||||||||||| ||||||||| || | |||||||| Sbjct 62471 CTTCAGTTCCTTGCTGAGTACTACATTAATTCTGTTTTTTAAAGGACGATGTTTCTCAGG 62412 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTT 4394 || |||||||| ||||| |||||||| || || | ||| || || Sbjct 62411 GATGGAGAACCAGGTCTTCTTACCCATTATTACCACATTTTGCTT 62367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||||||||| | ||||||| |||||||||||| || |||| ||||||||| ||||| Sbjct 75056 AAGTTTGTATTTTTTAAGATCAATTTCTGGAAAAAATGTATCACTTTCAAAGTCATGCAT 74997 Query 4116 GATCCTAGTCACAAACAGTTTAAGAT 4141 || || ||||||||||||| | ||| Sbjct 74996 AATTCTTGTCACAAACAGTTGATGAT 74971 >seq2821 Length=167147 Score = 100 bits (110), Expect = 2e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| || || ||||| ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 95063 CTTTGTACTCAGCTCCAAAATGTCTCCATTGGAAGCCATAAACAGGACCTAGGTCTCCTT 95122 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||| | ||||||| |||| ||||| ||| | ||| ||||| |||||||||| Sbjct 95123 CCTCTCTAGAAAAAAAACCCTGTTTGTCTAAGAATTCCCGAGAACCATTGGCATCCCAAA 95182 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | || || || || |||||||| Sbjct 95183 TCTTAACTCCCTTAGCAGAAAGCTCTTT 95210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361078995278363