Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2308 114 2e-20 seq3601 111 2e-19 seq8067 102 1e-16 >seq2308 Length=189564 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||||||||| | || || ||||| || || || |||||||| || || || | Sbjct 135512 CCTCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCT 135571 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct 135572 TCAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 135631 Query 24277 C 24277 | Sbjct 135632 C 135632 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 24385 TTTCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 24444 |||| ||| |||||| | ||| |||||||| | | |||||||||||| |||||||||| Sbjct 137476 TTTCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 137535 Query 24445 TTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 24500 |||| ||||| || || || || |||||||| | || || || | ||||||||| Sbjct 137536 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTGACTTGTACTTCT 137591 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 24632 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 24691 ||| ||||| ||||||||||||| |||||||| || || ||||| | |||||||||||| Sbjct 141301 CACCTCTTCAGCTGTCCAAAATGAGGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATG 141360 Query 24692 ATATTGAATTGGAAAAATAACAAA 24715 |||||||| || || || ||||| Sbjct 141361 GTATTGAATAGGGAAGATGACAAA 141384 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 23829 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 23888 ||||| || ||||| |||| ||||| || ||||| ||||| || || |||||||| ||| Sbjct 133901 GACATCACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCT 133960 Query 23889 TCTAATGATATATTTTCCATGAAATCGGATGGATT 23923 || | || ||||| ||||||||||| ||||||| Sbjct 133961 TCCAGAGAGATATTCTCCATGAAATCAAATGGATT 133995 >seq3601 Length=132737 Score = 111 bits (122), Expect = 2e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | || |||||||||||||| || || || || || ||||| |||||||||| Sbjct 114699 CACTGAAGACCTTCTTTGTTTCTTTGTGCAGGTTGGAGACAGCGATTCTCGCGGCTAGAA 114640 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 |||| || || || | | || || ||||||||| | || || | ||| ||||||| Sbjct 114639 TGGCGTAGTCGGGGTACTTGGTTGTGAGAGTGGCTGCGGTCTCTGCAGCCAGCGTGTCCA 114580 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTT 54941 |||||| |||||||| || | || | || ||||| |||||||| | |||| Sbjct 114579 GTTCTACGGTTGTTACCCCGCTGTAGAGACCCTGGATCACCTTCATGGTGATTT 114526 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| ||||| || ||||| | || | || ||||| || || ||||| || || ||||| Sbjct 125539 TACCTGAAACTCCCCAGAGAGAACCCGGCGGGTGTAGATGTTGCTGGTGTAGGGCTCCAC 125480 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 53262 ||||||||| || |||||||| ||||| || || || || ||||| || ||||| Sbjct 125479 AGACTCATTGTTGCCCAAAATCTGAGCCGTGGAAGCTGTTGGCATCGGGGCCAC 125426 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 53759 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 53818 || || ||||| || || ||||||||||||||||| | || || ||||| ||||| | Sbjct 122450 ATTTCGGTGCACAGGTTGCTACACTTGATGGTTCCGAGGTTCTGCTGATTGCTCTTCCGG 122391 Query 53819 TTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATC 53878 || || | |||||||||||| ||| | ||||| || || || |||| || || || || Sbjct 122390 TTGCAAGAATCCTTATAAAGCATGTACGGCGTTCCCGTCTCCGTCTGCGACTCAATGATG 122331 Query 53879 GCTTTCCA 53886 || | ||| Sbjct 122330 GCGTACCA 122323 >seq8067 Length=36449 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| ||||| | ||| ||||| || || || || ||||||| || | ||| || Sbjct 28360 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 28419 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 ||||||||||| | ||||| | ||||||||||| |||||||| || || ||||| ||| Sbjct 28420 AGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACGCA 28479 Query 24279 ATAAGTCTTTCTCC 24292 | | |||||| || Sbjct 28480 ACCACTCTTTCACC 28493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593431322088240