Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq8637 105 8e-18 seq1030 91.5 2e-13 seq607 87.8 2e-12 >seq8637 Length=30000 Score = 105 bits (116), Expect = 8e-18 Identities = 185/268 (69%), Gaps = 1/268 (0%) Strand=Plus/Minus Query 83273 GGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAG 83332 ||||| || || | |||||||| || ||||||| || | ||||| ||||| | Sbjct 12497 GGATGAGCATTTTCTCCGTTGACTTCACACTTCTGAAACACAGGGAAGTTGGGCTCATAT 12438 Query 83333 CCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCC 83392 || || || || ||||| | ||||||| | |||||| |||| ||| |||||| Sbjct 12437 CCATTGCCTGGGCGGACATTTCTCAGGGATTTTAGGATCTCTTCATTGGTGGCATTTTCC 12378 Query 83393 TGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGC 83452 |||||||| ||||||||| | ||||| | |||| || ||| ||| || | || Sbjct 12377 TGGTGACCAAACTGGTTAGAGGGGAAAGCCAGCATGGTGAG-CCCTGAGGACCGAAATGC 12319 Query 83453 CGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACG 83512 | |||||| || | | ||||||| | ||| || ||| | |||||||| || || ||| Sbjct 12318 CACTGCAGTTCATGGAACTGAGTGAAATCCTGGGTCGTCATGCCTCAGAGAGAAGCCACG 12259 Query 83513 TTCTCGATGAGCAAGACCCGGCCCCGTA 83540 || || ||||| |||| |||| || Sbjct 12258 TTGGAAATCAGCAACACCCTTCCCCATA 12231 >seq1030 Length=308847 Score = 91.5 bits (100), Expect = 2e-13 Identities = 179/265 (68%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 83266 GAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGG 83325 ||| || || || || || | || ||||| || |||||||| || | | ||||| || Sbjct 149508 GAAAAGAGGGTGAGCATTTTCCCCATTGACTTCACACTTCTCAAACACAGTGAAGTTGGG 149449 Query 83326 CTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGC 83385 ||| || || || || | ||| | |||||||| || |||||| |||| ||| Sbjct 149448 CTCATGTCCATTGCCTGGGCAGACATATTTCAGGGATTTCAGGATCTCTCCATTGGTGGC 149389 Query 83386 GTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCC 83445 |||||||||||||| ||||||||| | ||||| | ||||| |||| | || || Sbjct 149388 ATTTTCCTGGTGACCAAACTGGTTAGAGGGGAAAGCCAGCACCGTGAGCCTCTGAAGACC 149329 Query 83446 TAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGA 83505 | || ||||||| || | | || |||| | ||| || | | | ||||| || || Sbjct 149328 GAAATGCTGCTGCAGTTCATGGAACTAAGTGAAGTCCTGGGTCATCGTGCCTCAAAGAGA 149269 Query 83506 CGCTACGTTCTCGATGAGCAAGACC 83530 || || || || ||||| ||| Sbjct 149268 AGCCACATTGGAAATCAGCAACACC 149244 >seq607 Length=392461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||||||||| ||||||||| | ||||| | ||||| |||||| ||| || | | Sbjct 121432 CCTGGTGACCAAACTGGTTAGAGGGGAAAGCCAGCACGGTGAGCCCCTGAGGACCGAAAC 121491 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||| || | | ||||||| | |||||| ||| | |||||||| || || | Sbjct 121492 GCCGCTGCAGTTCATGGAACTGAGTGAAGTCCCGGGTCGTCGTGCCTCAGAGCGAAGCCA 121551 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCG 83538 |||| || ||||| ||| ||||| Sbjct 121552 CGTTGGAAATCAGCAACACCTTTCCCCG 121579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608499151634520