Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq5783 147 4e-30 >seq5783 Length=75334 Score = 147 bits (162), Expect = 4e-30 Identities = 135/171 (79%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 |||||| |||| ||||||| |||||| ||||| |||||||| || || |||| || || Sbjct 48204 GATAGCAGGAGCGTTATGGTGGTACTACATATCAAAAGGGATTGAGTATCTGGACACAGT 48145 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 || ||||| || || || ||||||||||| | |||||||| || || ||||| ||||| Sbjct 48144 GTTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGTTTTCTTCATGTCTATCACCATTT 48085 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 |||||||||||| | | ||||| || || |||||| |||| ||||| || Sbjct 48084 CACTATGTTTACTTTGTGGTGGATTGGCATAAAATGGGTTGCAGGAGGACA 48034 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 52189 CAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTTTCCA 52248 ||||||||| | |||| || || || || |||| |||||||| |||||||| ||||| Sbjct 44745 CAGTTCCATGTGACTATTGGCCACACCGCCCTGTCTATTTACATTGATTGCCCCTTTCCT 44686 Query 52249 AAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGGTAAC 52308 |||||||| || ||| || ||| ||||| | | | |||||| || |||||||||||| Sbjct 44685 AAATGGATGCACTGGGGTGTCATTGTCTATGCCACCACTTTCATTTTTCTGTTTGGTAAC 44626 Query 52309 TTCTATTTTAGAACATACAAGA 52330 ||||| | | | |||||||||| Sbjct 44625 TTCTACTATCGGACATACAAGA 44604 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 ||||||||||||||||| | ||| |||| || |||||| ||||||| | || ||||| Sbjct 46586 GCATTTTTTGGAGCTCATATGAATGCTTTCATTCATGTTGTTATGTATATGTACTATGGA 46527 Query 52117 ATGGCCGCTTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATA 52176 | || || ||||| || | ||| ||||| || |||||||| || ||| | || ||| Sbjct 46526 CTAGCTGCCTGTGGCCCAAAATTCCACAAGTACCTTTGGTGGAAGCGATATTTGACCATA 46467 Query 52177 ATGCAGTTGGTA 52188 ||||| || ||| Sbjct 46466 ATGCAATTAGTA 46455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922745437544520