Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3601 129 5e-25 seq6913 82.4 7e-11 >seq3601 Length=132737 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105 ||||||| || ||| ||| |||| ||||||||||| || || ||||||||||| || | Sbjct 122479 CCACCTCATCCTTGCTGGTGAACTCCACAATTTCGGTGCACAGGTTGCTACACTTGATGG 122420 Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165 | || | || ||| ||||| || || ||||| |||||||| || ||||||||||||| Sbjct 122419 TTCCGAGGTTCTGCTGATTGCTCTTCCGGTTGCAAGAATCCTTATAAAGCATGTACGGCG 122360 Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 | |||||||| ||||||||| ||||| || ||||| Sbjct 122359 TTCCCGTCTCCGTCTGCGACTCAATGATGGCGTACCACA 122321 >seq6913 Length=53205 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || || |||||| | || || || || | Sbjct 52982 ATGCAGATCTTTGTGAAGACCTTGACTGGGAAGACCATCACCCTGGAGGTGGAGCCAAGC 52923 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||||||| | || || |||||| Sbjct 52922 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 52863 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || |||||||| ||| ||||||| || | ||| || ||| Sbjct 52862 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACGCTTTCCGACTACAAC 52803 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || || || || || || ||||| || | ||||||| ||| Sbjct 52802 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTGCGTTTGAGGGGTGGT 52755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445548459234960