Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2308 120 3e-22 seq8067 111 1e-19 >seq2308 Length=189564 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| || || ||||||||||| || | || ||||| | |||||||| || Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||||||||| | ||||| || ||||||||||| ||||| || || || ||||||||| Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 135633 Query 11774 ACTACTCTTTCTCC 11787 ||||||| ||| || Sbjct 135634 ACTACTCGTTCACC 135647 Score = 104 bits (114), Expect = 2e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 11880 TTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATAT 11939 ||||| || |||| ||| ||| ||||| || | |||||||||||||||||||||||| | Sbjct 137476 TTTCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 137535 Query 11940 TTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTG 11981 ||||||| || || || || ||||||||||| || || |||| Sbjct 137536 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTG 137577 >seq8067 Length=36449 Score = 111 bits (122), Expect = 1e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| ||||| || || |||||||| || || || | || ||||| || |||| || | Sbjct 28358 CTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 28417 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 | | ||||||||| || ||||| | |||||||||||| ||||| || ||||| ||||| | Sbjct 28418 TGAGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACG 28477 Query 11772 CTACTACTCTTTCTCC 11787 | || |||||||| || Sbjct 28478 CAACCACTCTTTCACC 28493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468295732368720