Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2308 125 1e-23 seq8067 111 2e-19 seq3601 91.5 2e-13 >seq2308 Length=189564 Score = 125 bits (138), Expect = 1e-23 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||||||||| || || || ||||| || || || |||||||| || || || | Sbjct 135512 CCTCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCT 135571 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||||||||| || ||||| || |||||||||||||||||||| ||||| ||||| | Sbjct 135572 TCAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 135631 Query 50102 CAAC 50105 | || Sbjct 135632 CTAC 135635 Score = 96.9 bits (106), Expect = 5e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 50210 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 |||| ||| |||||| | ||||||||| || | | |||||||||||| |||||||||| Sbjct 137476 TTTCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 137535 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 |||| ||||| ||||| || || |||||||| | || || || | || |||||| Sbjct 137536 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTGACTTGTACTTCT 137591 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 49654 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 49713 ||||| || ||||| |||| ||||| || ||||| ||||| || || |||||||| ||| Sbjct 133901 GACATCACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCT 133960 Query 49714 TCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 |||| || ||||| |||||||||||||| ||||| Sbjct 133961 TCCAGAGAGATATTCTCCATGAAATCAAATGGATT 133995 Score = 87.8 bits (96), Expect = 3e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517 || ||||| ||||||||||||| |||||||| || || ||||| | |||||||||||| Sbjct 141302 ACCTCTTCAGCTGTCCAAAATGAGGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGG 141361 Query 50518 TATTGGATTGGGAAAATAACAAA 50540 ||||| || ||||| || ||||| Sbjct 141362 TATTGAATAGGGAAGATGACAAA 141384 >seq8067 Length=36449 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| ||||| ||||| ||||| || || || || ||||||| || | ||| || Sbjct 28360 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 28419 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||||||||| | ||||| | |||||||||||||||||||| || || ||||| ||| Sbjct 28420 AGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACGCA 28479 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 28480 ACCACTCTTTCACC 28493 >seq3601 Length=132737 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 79669 ATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 79728 ||||| ||||| ||||| |||||||| |||||||| | || || ||||| ||||| | Sbjct 122450 ATTTCGGTGCACAGGTTGCTACACTTGATGGTTCCGAGGTTCTGCTGATTGCTCTTCCGG 122391 Query 79729 TTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 79788 || || | |||||||||||| ||| |||| || || || || |||| || || || || Sbjct 122390 TTGCAAGAATCCTTATAAAGCATGTACGGCGTTCCCGTCTCCGTCTGCGACTCAATGATG 122331 Query 79789 GCTTTCCA 79796 || | ||| Sbjct 122330 GCGTACCA 122323 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 79997 || ||||||||||||||||| || ||||| ||||| ||| || || || | | || || Sbjct 120265 ACACGTTTCATAAAGAGATCTGGGATCCAGAGAGC-ATAGAAAAGGTCCCGAGCCCTCTG 120207 Query 79998 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057 |||||| || || || || || || | ||||| ||| | | | |||| | ||||| || Sbjct 120206 CTCCTCCTTCCCAGTGTTTTTCTTCAAGTCGAGAAACTCAAAGACATCAAAGTGCCATGG 120147 Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTC 80086 ||||| ||| ||||| | |||| |||| Sbjct 120146 TTCCAGGTAGATGGCAAAGGCTCCAGGTC 120118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717917629405320